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The map label for this gene is smp [C]

Identifier: 59711115

GI number: 59711115

Start: 545597

End: 546193

Strand: Reverse

Name: smp [C]

Synonym: VF_0508

Alternate gene names: 59711115

Gene position: 546193-545597 (Counterclockwise)

Preceding gene: 59711131

Following gene: 59711104

Centisome position: 18.85

GC content: 36.52

Gene sequence:

>597_bases
ATGCTTTCTCAAAACTTTGTCATTAAAGGATTGATGCTGCTTTCTCTAATGGCATTCAGTTACTTTATTTTGATCAACAG
TACGATCATCAGTGACAGTAACCAAGTTATTCAAAACAAACAATTACAAGATCTTAGCCGAACAATGACTCGACAAGCGG
CTTTATTTGCCGTTGATAGCATTAAAGAAGATAACCATGAAGCATTATTCCAGTTAACTAATAACCTTGCTAAAGAGCGT
TTAGTTTTTGATGCCACAATATATGACGCTGAAGGTAGAATCTTAGGAAAAAGTGATAATGCACTAACGGCTTCTCAAAT
TACTGGATTAAATACGCCATTGTCTATTGACGGTATTGGTCGTCAGCAGTTGATTGAACCTATCATTAAAGATGACCATC
TACTTGGCTTTTTACGTGTGACATTTGAAAAATCAACATTGACCGGCTTTGCAAATCACCACTATCGTAAAAGTGACCGT
TTAATGTTTGGTATGCTCGCAATCAGTTTGGTTTCAGGGATGCTGATTATGGGGTTACTAAGAAAAAGAAAAGATGCTTC
CAAACCAATCACCACATTGTTTGGTGGTAAAGCATAA

Upstream 100 bases:

>100_bases
CCGATTGAAGAGGAGTTGAGCAAGAGGCAAATGACATAAACTGCTTTTTTTCGATAAATTCAGTATAATTACTGCATTCA
TATCTTATTAGGTGGTTGTG

Downstream 100 bases:

>100_bases
AAAGAAAGGCGATGAAATTAACCTCATCGCCTTTTTTATTTCTAACGGTTTTCGTTATGCGTGTTATTTATCGCCAAGTA
ATACTGAATCTAATGCAATC

Product: SMP protein precursor

Products: NA

Alternate protein names: SMP Protein; SerB-Cotransposed Membrane Protein; Peripheral Membrane Protein; Smp-Like Protein; AphA Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLSQNFVIKGLMLLSLMAFSYFILINSTIISDSNQVIQNKQLQDLSRTMTRQAALFAVDSIKEDNHEALFQLTNNLAKER
LVFDATIYDAEGRILGKSDNALTASQITGLNTPLSIDGIGRQQLIEPIIKDDHLLGFLRVTFEKSTLTGFANHHYRKSDR
LMFGMLAISLVSGMLIMGLLRKRKDASKPITTLFGGKA

Sequences:

>Translated_198_residues
MLSQNFVIKGLMLLSLMAFSYFILINSTIISDSNQVIQNKQLQDLSRTMTRQAALFAVDSIKEDNHEALFQLTNNLAKER
LVFDATIYDAEGRILGKSDNALTASQITGLNTPLSIDGIGRQQLIEPIIKDDHLLGFLRVTFEKSTLTGFANHHYRKSDR
LMFGMLAISLVSGMLIMGLLRKRKDASKPITTLFGGKA
>Mature_198_residues
MLSQNFVIKGLMLLSLMAFSYFILINSTIISDSNQVIQNKQLQDLSRTMTRQAALFAVDSIKEDNHEALFQLTNNLAKER
LVFDATIYDAEGRILGKSDNALTASQITGLNTPLSIDGIGRQQLIEPIIKDDHLLGFLRVTFEKSTLTGFANHHYRKSDR
LMFGMLAISLVSGMLIMGLLRKRKDASKPITTLFGGKA

Specific function: Unknown

COG id: COG3726

COG function: function code R; Uncharacterized membrane protein affecting hemolysin expression

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790847, Length=150, Percent_Identity=27.3333333333333, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22052; Mature: 22052

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQNFVIKGLMLLSLMAFSYFILINSTIISDSNQVIQNKQLQDLSRTMTRQAALFAVDS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKEDNHEALFQLTNNLAKERLVFDATIYDAEGRILGKSDNALTASQITGLNTPLSIDGIG
HCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCCEEHHHHCCCCCCEEECCCC
RQQLIEPIIKDDHLLGFLRVTFEKSTLTGFANHHYRKSDRLMFGMLAISLVSGMLIMGLL
HHHHHHHHHCCCHHEEEEHEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RKRKDASKPITTLFGGKA
HHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MLSQNFVIKGLMLLSLMAFSYFILINSTIISDSNQVIQNKQLQDLSRTMTRQAALFAVDS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKEDNHEALFQLTNNLAKERLVFDATIYDAEGRILGKSDNALTASQITGLNTPLSIDGIG
HCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEECCCCCCEEHHHHCCCCCCEEECCCC
RQQLIEPIIKDDHLLGFLRVTFEKSTLTGFANHHYRKSDRLMFGMLAISLVSGMLIMGLL
HHHHHHHHHCCCHHEEEEHEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RKRKDASKPITTLFGGKA
HHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA