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The map label for this gene is elbB [H]

Identifier: 58617666

GI number: 58617666

Start: 1483175

End: 1483849

Strand: Reverse

Name: elbB [H]

Synonym: ERGA_CDS_09390

Alternate gene names: 58617666

Gene position: 1483849-1483175 (Counterclockwise)

Preceding gene: 58617671

Following gene: 58617663

Centisome position: 98.93

GC content: 28.3

Gene sequence:

>675_bases
TTGGAGAATTTTATGGTGTTAAATTCTGCTATAATTTTGGCTGGATGTGGTCATATGGATGGTTCAGAAATTAGAGAAGC
TGTGTTAGTTATGCTTGAACTTGATAGACATAATGTAAAATTTAAATGTTTTGCTCCAAATAATGATCAAAAGCATGTTA
TGGATCATTATAATAAAAAAACTACGGGGGAAATTAGGAATATTTTGGTAGAATCTGCTAGAATAGCTAGAGGTTCTATA
TATGATATAGAAGAAATAAATCATGAAGAATTTGATATGTTAGTGATTCCTGGTGGTTATGGTGTAGCAAAAAACTTTTC
TAATTTATTTGATGGTGATGAATATAATGATTCTATATTACCCAAATTTAAAAATGCTGTTTTAAAATTTTTTAATTCTA
ATAAACCTATAGGAGCAGTTTGTATATCACCTGCAGTATTAGTTGCATCATTAAAAGATGTTGCAAAAATCAAGGTAACT
ATAGGTGAAGATTCTGATAACTTAATAGATAAGTTAGGAGGAATTCATATTGATTGTCCAACCATAAAATCTGTACGGGA
TGAAACTAATAAAATATTCTCCTGTTCTGCATACATGAGAAATGATAGTATTTATAATGTATATTTAGGAATACAAGATA
TGATATCATCTATGGTAAATTCATTAAAGAACTAG

Upstream 100 bases:

>100_bases
CTACAACATTATATAAAGTGTACATGAGTATATAATGATTAAATAAGTTTGTGAAACATAGATTAATTAGTATACAATAG
TGCAAATTGAATTTTGAAAT

Downstream 100 bases:

>100_bases
TATGGTTATTTATATTTATCCATTTTATAACTTAATTTATAAGTGATACTGTTTTGTAAAGAAAGTACTATTGTTTTTGA
TAATCGTGTTTAAAAATTAA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MENFMVLNSAIILAGCGHMDGSEIREAVLVMLELDRHNVKFKCFAPNNDQKHVMDHYNKKTTGEIRNILVESARIARGSI
YDIEEINHEEFDMLVIPGGYGVAKNFSNLFDGDEYNDSILPKFKNAVLKFFNSNKPIGAVCISPAVLVASLKDVAKIKVT
IGEDSDNLIDKLGGIHIDCPTIKSVRDETNKIFSCSAYMRNDSIYNVYLGIQDMISSMVNSLKN

Sequences:

>Translated_224_residues
MENFMVLNSAIILAGCGHMDGSEIREAVLVMLELDRHNVKFKCFAPNNDQKHVMDHYNKKTTGEIRNILVESARIARGSI
YDIEEINHEEFDMLVIPGGYGVAKNFSNLFDGDEYNDSILPKFKNAVLKFFNSNKPIGAVCISPAVLVASLKDVAKIKVT
IGEDSDNLIDKLGGIHIDCPTIKSVRDETNKIFSCSAYMRNDSIYNVYLGIQDMISSMVNSLKN
>Mature_224_residues
MENFMVLNSAIILAGCGHMDGSEIREAVLVMLELDRHNVKFKCFAPNNDQKHVMDHYNKKTTGEIRNILVESARIARGSI
YDIEEINHEEFDMLVIPGGYGVAKNFSNLFDGDEYNDSILPKFKNAVLKFFNSNKPIGAVCISPAVLVASLKDVAKIKVT
IGEDSDNLIDKLGGIHIDCPTIKSVRDETNKIFSCSAYMRNDSIYNVYLGIQDMISSMVNSLKN

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=223, Percent_Identity=32.2869955156951, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI296531408, Length=223, Percent_Identity=28.6995515695067, Blast_Score=104, Evalue=5e-23,
Organism=Escherichia coli, GI87082228, Length=212, Percent_Identity=37.7358490566038, Blast_Score=149, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 24987; Mature: 24987

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFMVLNSAIILAGCGHMDGSEIREAVLVMLELDRHNVKFKCFAPNNDQKHVMDHYNKK
CCCEEEECCEEEEEECCCCCHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHCCCC
TTGEIRNILVESARIARGSIYDIEEINHEEFDMLVIPGGYGVAKNFSNLFDGDEYNDSIL
CHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHH
PKFKNAVLKFFNSNKPIGAVCISPAVLVASLKDVAKIKVTIGEDSDNLIDKLGGIHIDCP
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCEEEECC
TIKSVRDETNKIFSCSAYMRNDSIYNVYLGIQDMISSMVNSLKN
CHHHHHHHHHHEEEEEHEECCCCEEEEEECHHHHHHHHHHHHCC
>Mature Secondary Structure
MENFMVLNSAIILAGCGHMDGSEIREAVLVMLELDRHNVKFKCFAPNNDQKHVMDHYNKK
CCCEEEECCEEEEEECCCCCHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHCCCC
TTGEIRNILVESARIARGSIYDIEEINHEEFDMLVIPGGYGVAKNFSNLFDGDEYNDSIL
CHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHH
PKFKNAVLKFFNSNKPIGAVCISPAVLVASLKDVAKIKVTIGEDSDNLIDKLGGIHIDCP
HHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCEEEECC
TIKSVRDETNKIFSCSAYMRNDSIYNVYLGIQDMISSMVNSLKN
CHHHHHHHHHHEEEEEHEECCCCEEEEEECHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]