Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
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Accession | NC_006831 |
Length | 1,499,920 |
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The map label for this gene is 58617648
Identifier: 58617648
GI number: 58617648
Start: 1464268
End: 1464699
Strand: Reverse
Name: 58617648
Synonym: ERGA_CDS_09210
Alternate gene names: NA
Gene position: 1464699-1464268 (Counterclockwise)
Preceding gene: 58617658
Following gene: 58617644
Centisome position: 97.65
GC content: 30.09
Gene sequence:
>432_bases ATGTTAATAACATGGTTTTTTATGACATACGATATTGATTTTTTGATAGAAAAGAGTAGTGGTTTTGATGTTTATTCTGG TGAGATGCACTTGAATCCAGCTGGGAGTGAGTATTATATGAGTGGATCTGTTACTAATCAACATACAGGAGATGTTGGGG AACTAGATTTAAAATATAATAATATTACTGTTGATAATAACTCTGTAAAATGCAATATTGATATTGCTCTTCAATGTTAC CATTCCAGTGATAAAATGTATGAAAGTGCATTTTTTAATAGAGATTTTAAAATATCAAATCTAGATAGAGGTAATGTGAT GTTAATTGATGATGATTACTCATTACCACAAAAACTACCAGGAGAAGTTAAAGTTGAGACTAAGCAAAATCATGTTATAA TGCTTGTGCGTTCAAGTGAAATGTATGCGTAG
Upstream 100 bases:
>100_bases CTACCATATTTTAATTTATGATAGATTTACTATATTTAGGTTAAAAAAATAATTTTTTTGCATAAAATTTTTAATAAGTT ATTATATGTATATATAATTT
Downstream 100 bases:
>100_bases TAGTTCCTACTTGACAGTTAACTGTTTTATGATAATAAGCTTATGTTGTCAATTTGATATATGTTTCAAATATAACTATA AAATTCATTTTGGTAATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MLITWFFMTYDIDFLIEKSSGFDVYSGEMHLNPAGSEYYMSGSVTNQHTGDVGELDLKYNNITVDNNSVKCNIDIALQCY HSSDKMYESAFFNRDFKISNLDRGNVMLIDDDYSLPQKLPGEVKVETKQNHVIMLVRSSEMYA
Sequences:
>Translated_143_residues MLITWFFMTYDIDFLIEKSSGFDVYSGEMHLNPAGSEYYMSGSVTNQHTGDVGELDLKYNNITVDNNSVKCNIDIALQCY HSSDKMYESAFFNRDFKISNLDRGNVMLIDDDYSLPQKLPGEVKVETKQNHVIMLVRSSEMYA >Mature_143_residues MLITWFFMTYDIDFLIEKSSGFDVYSGEMHLNPAGSEYYMSGSVTNQHTGDVGELDLKYNNITVDNNSVKCNIDIALQCY HSSDKMYESAFFNRDFKISNLDRGNVMLIDDDYSLPQKLPGEVKVETKQNHVIMLVRSSEMYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16411; Mature: 16411
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLITWFFMTYDIDFLIEKSSGFDVYSGEMHLNPAGSEYYMSGSVTNQHTGDVGELDLKYN CEEEEEEEEEEEEEEEECCCCCEEEECEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEC NITVDNNSVKCNIDIALQCYHSSDKMYESAFFNRDFKISNLDRGNVMLIDDDYSLPQKLP EEEECCCCEEEEEEEEEEEEECCCCEEHHHHCCCCEEECCCCCCCEEEEECCCCCCCCCC GEVKVETKQNHVIMLVRSSEMYA CCEEEEECCCEEEEEEECCCCCC >Mature Secondary Structure MLITWFFMTYDIDFLIEKSSGFDVYSGEMHLNPAGSEYYMSGSVTNQHTGDVGELDLKYN CEEEEEEEEEEEEEEEECCCCCEEEECEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEC NITVDNNSVKCNIDIALQCYHSSDKMYESAFFNRDFKISNLDRGNVMLIDDDYSLPQKLP EEEECCCCEEEEEEEEEEEEECCCCEEHHHHCCCCEEECCCCCCCEEEEECCCCCCCCCC GEVKVETKQNHVIMLVRSSEMYA CCEEEEECCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA