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The map label for this gene is msp4 [H]

Identifier: 58617644

GI number: 58617644

Start: 1456863

End: 1457714

Strand: Reverse

Name: msp4 [H]

Synonym: ERGA_CDS_09170

Alternate gene names: 58617644

Gene position: 1457714-1456863 (Counterclockwise)

Preceding gene: 58617648

Following gene: 58617641

Centisome position: 97.19

GC content: 32.16

Gene sequence:

>852_bases
ATGGATAAAGAAATGAATTATAAGGAATTTGTTTTAGGTGTTACATTAAGTGCATTGTTGTTTTCTTTACTACCTCAACG
TGCTATATCTGATATGGATGTTTCAGAAAATAGAAGTAGGTTTTATGCAGGTGTTCAGTATAGGACAGGTATACCAAATT
TTGATAATTTTTCAGCTTCAGAAACAATCCCTGGTTTAACTAAGGGTGTTTATGGATTAGATTTGGATCTAAGTAAATCT
GATATTACAAAACGTGCTAATTTTACAAGATTATATAATCCTACTTATAGTACCAGTTCTACAGGGATAGGTGGTATGTT
TGGGTACTATTTTGATAATATAAGAATGGAATTTGAAACATCTTATTCAAGTTTCGGAATTGAAAGGCAGTGGTATCCTG
AAGGGAGTCAAAGTCATAAGTTCTGTGCTGTATCTCGTAGTGCAACTCCTAGTACTGACTCAAGTAATAATAATGATTTT
GTAGTATTAGAAAATAATGGGGTTAAGATTAGAACATTGAATGTAAATTTTTGTTATGATGTTGCTCACGGAAATATTCC
TTTAGCACCTTACGTGTGTGCTGGTATTGGTGGGGATTACGTAAAATTTATAGGAGTTTCATTGCCTAAATTTTCTTATC
AGCTTAAATTTGGAGTAAACTACCCACTAAGTATTCGTACTATGCTATTTGGTGGTGGGTATTATCATAAAGTGATGGGT
AGTAAATATGATAGGGTAAAAGTGGTTTATCATCCTGTTCAGTTAAATACTGTTCCTAAAATGACATTTGTTTCTGCTAA
TTTAGATATTGATTATTTTGGTTGTGAGGTTGGGATTAGATTTTTCTTATAG

Upstream 100 bases:

>100_bases
GTATATAAATAACCTTATTTCTTTTGTTTTGTTCTGTATACAATGCTTGACTTAATATACTTTGTTATAGTACACTCCCG
TAGTTTACCTTTGGTTATTA

Downstream 100 bases:

>100_bases
TAAATAAGTAATATATAGTTTTTTTATATTAATACTTGATGTTATGTTTTTTTAGTGAAGTTATCTATATTTACTACTCC
TTGTCTTTAACTATGTATTT

Product: Map1-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MDKEMNYKEFVLGVTLSALLFSLLPQRAISDMDVSENRSRFYAGVQYRTGIPNFDNFSASETIPGLTKGVYGLDLDLSKS
DITKRANFTRLYNPTYSTSSTGIGGMFGYYFDNIRMEFETSYSSFGIERQWYPEGSQSHKFCAVSRSATPSTDSSNNNDF
VVLENNGVKIRTLNVNFCYDVAHGNIPLAPYVCAGIGGDYVKFIGVSLPKFSYQLKFGVNYPLSIRTMLFGGGYYHKVMG
SKYDRVKVVYHPVQLNTVPKMTFVSANLDIDYFGCEVGIRFFL

Sequences:

>Translated_283_residues
MDKEMNYKEFVLGVTLSALLFSLLPQRAISDMDVSENRSRFYAGVQYRTGIPNFDNFSASETIPGLTKGVYGLDLDLSKS
DITKRANFTRLYNPTYSTSSTGIGGMFGYYFDNIRMEFETSYSSFGIERQWYPEGSQSHKFCAVSRSATPSTDSSNNNDF
VVLENNGVKIRTLNVNFCYDVAHGNIPLAPYVCAGIGGDYVKFIGVSLPKFSYQLKFGVNYPLSIRTMLFGGGYYHKVMG
SKYDRVKVVYHPVQLNTVPKMTFVSANLDIDYFGCEVGIRFFL
>Mature_283_residues
MDKEMNYKEFVLGVTLSALLFSLLPQRAISDMDVSENRSRFYAGVQYRTGIPNFDNFSASETIPGLTKGVYGLDLDLSKS
DITKRANFTRLYNPTYSTSSTGIGGMFGYYFDNIRMEFETSYSSFGIERQWYPEGSQSHKFCAVSRSATPSTDSSNNNDF
VVLENNGVKIRTLNVNFCYDVAHGNIPLAPYVCAGIGGDYVKFIGVSLPKFSYQLKFGVNYPLSIRTMLFGGGYYHKVMG
SKYDRVKVVYHPVQLNTVPKMTFVSANLDIDYFGCEVGIRFFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 31817; Mature: 31817

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKEMNYKEFVLGVTLSALLFSLLPQRAISDMDVSENRSRFYAGVQYRTGIPNFDNFSAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
ETIPGLTKGVYGLDLDLSKSDITKRANFTRLYNPTYSTSSTGIGGMFGYYFDNIRMEFET
CCCCCHHCCEEEEEEECCHHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEEEEEC
SYSSFGIERQWYPEGSQSHKFCAVSRSATPSTDSSNNNDFVVLENNGVKIRTLNVNFCYD
CHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEE
VAHGNIPLAPYVCAGIGGDYVKFIGVSLPKFSYQLKFGVNYPLSIRTMLFGGGYYHKVMG
ECCCCCCCHHHEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCEEEHHHC
SKYDRVKVVYHPVQLNTVPKMTFVSANLDIDYFGCEVGIRFFL
CCCCEEEEEEEEEEECCCCCEEEEEECCCEEEEEHEEEEEECC
>Mature Secondary Structure
MDKEMNYKEFVLGVTLSALLFSLLPQRAISDMDVSENRSRFYAGVQYRTGIPNFDNFSAS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
ETIPGLTKGVYGLDLDLSKSDITKRANFTRLYNPTYSTSSTGIGGMFGYYFDNIRMEFET
CCCCCHHCCEEEEEEECCHHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEEEEEC
SYSSFGIERQWYPEGSQSHKFCAVSRSATPSTDSSNNNDFVVLENNGVKIRTLNVNFCYD
CHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEE
VAHGNIPLAPYVCAGIGGDYVKFIGVSLPKFSYQLKFGVNYPLSIRTMLFGGGYYHKVMG
ECCCCCCCHHHEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCEEEHHHC
SKYDRVKVVYHPVQLNTVPKMTFVSANLDIDYFGCEVGIRFFL
CCCCEEEEEEEEEEECCCCCEEEEEECCCEEEEEHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]