Definition | Thermus thermophilus HB8 chromosome, complete genome. |
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Accession | NC_006461 |
Length | 1,849,742 |
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The map label for this gene is 55980892
Identifier: 55980892
GI number: 55980892
Start: 874437
End: 874670
Strand: Reverse
Name: 55980892
Synonym: TTHA0923
Alternate gene names: NA
Gene position: 874670-874437 (Counterclockwise)
Preceding gene: 55980893
Following gene: 55980891
Centisome position: 47.29
GC content: 57.26
Gene sequence:
>234_bases GTGACGAGCGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACTTCCTTCTAAGGAGGAATGGGCATCATTCACAATC AGCAAGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACGGATTCGCCTCGGCCCGCCTAGGGACTGGATCTATGACC CCGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACCATTGGTGGAGGCGCGTGATAAGCGAGTGGAGGTGA
Upstream 100 bases:
>100_bases CTTCACCCACGACAAAGGGGTCGCTTGATGGGCAAGACAGTAATCCCCTTACGGGGCTCAATCCCTTGCAACCCTTAGGA GCTACCTTTTTGCGCTTCCC
Downstream 100 bases:
>100_bases GGTGGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACTGGAGAAGACAAGGGCCTTTTGGAGGGCCATAACCGAGTC GCATGTATCTTGCCCCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MTSVAIPLRGSIPCNFLLRRNGHHSQSASRNPLTGLNPLQRIRLGPPRDWIYDPVAIPLRGSIPCNHWWRRVISEWR
Sequences:
>Translated_77_residues MTSVAIPLRGSIPCNFLLRRNGHHSQSASRNPLTGLNPLQRIRLGPPRDWIYDPVAIPLRGSIPCNHWWRRVISEWR >Mature_76_residues TSVAIPLRGSIPCNFLLRRNGHHSQSASRNPLTGLNPLQRIRLGPPRDWIYDPVAIPLRGSIPCNHWWRRVISEWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8905; Mature: 8774
Theoretical pI: Translated: 12.26; Mature: 12.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVAIPLRGSIPCNFLLRRNGHHSQSASRNPLTGLNPLQRIRLGPPRDWIYDPVAIPLR CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCC GSIPCNHWWRRVISEWR CCCCHHHHHHHHHHHCC >Mature Secondary Structure TSVAIPLRGSIPCNFLLRRNGHHSQSASRNPLTGLNPLQRIRLGPPRDWIYDPVAIPLR CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCC GSIPCNHWWRRVISEWR CCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA