Click here to switch to the map view.

The map label for this gene is 55980880

Identifier: 55980880

GI number: 55980880

Start: 871811

End: 872395

Strand: Reverse

Name: 55980880

Synonym: TTHA0911

Alternate gene names: NA

Gene position: 872395-871811 (Counterclockwise)

Preceding gene: 55980884

Following gene: 55980873

Centisome position: 47.16

GC content: 60.0

Gene sequence:

>585_bases
GTGAAGACGTCCCTGGCCTCGGTCGTGAGGGACGTGGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACGAACCTCC
TCGGGCCCACCGAGGGGGTAATCCTCGCAAAGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACCTGAACCAGAAGG
CCCTCTGGGCGGCGGCGTACGCCGTGGCGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACGCGATTGGCGTCGCCC
TCCCCGTTATCGCTTACGAGTCGCAATCCCCTTACGGGGCTCAATCCCTTGCAACGGTACCCCCCAAAGAACCCCGTCCT
GGACGGCGCCGCCAGAGGGGGGTTTGTGAGAAAGATGAAGCTTGGAATATGCACACGGCGAATAACGGGGGTTTTCGGGG
GTTTATGCCGATGCAAAGCCACAGGAGGAAGGGGCGATGAAAAGAAAAAGCGCATATTCGCCTTCCGCAAGGGAAAAACT
GGCTTTCAAGGTCCCCACCCGGAGGTCCGGGTTAGGGGGAGTATAGCACACACCGCAACGTTGGGCCAGGTCAAAATTTC
GGCGAGGAAGGGGCTACCGGACTGA

Upstream 100 bases:

>100_bases
TACGGGGCTCAATCCCTTGCAACACCTCATGGGGGAGTAAGATAGGCGGGAAAGGAGGGAGGTCGCAATCCCCTTACGGG
GCTCAATCCCTTGCAACCAC

Downstream 100 bases:

>100_bases
GCTTTGTTTTTCAAAGCCCAAAGAAAGCCAGTTGCATCGTAATTTTGCTGACAAGTATAGCAAAGGCCCGCTCTACCGCC
AGAAGTAAAAGGGGGCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKTSLASVVRDVVAIPLRGSIPCNEPPRAHRGGNPRKVAIPLRGSIPCNLNQKALWAAAYAVASQSPYGAQSLATRLASP
SPLSLTSRNPLTGLNPLQRYPPKNPVLDGAARGGFVRKMKLGICTRRITGVFGGLCRCKATGGRGDEKKKRIFAFRKGKT
GFQGPHPEVRVRGSIAHTATLGQVKISARKGLPD

Sequences:

>Translated_194_residues
MKTSLASVVRDVVAIPLRGSIPCNEPPRAHRGGNPRKVAIPLRGSIPCNLNQKALWAAAYAVASQSPYGAQSLATRLASP
SPLSLTSRNPLTGLNPLQRYPPKNPVLDGAARGGFVRKMKLGICTRRITGVFGGLCRCKATGGRGDEKKKRIFAFRKGKT
GFQGPHPEVRVRGSIAHTATLGQVKISARKGLPD
>Mature_194_residues
MKTSLASVVRDVVAIPLRGSIPCNEPPRAHRGGNPRKVAIPLRGSIPCNLNQKALWAAAYAVASQSPYGAQSLATRLASP
SPLSLTSRNPLTGLNPLQRYPPKNPVLDGAARGGFVRKMKLGICTRRITGVFGGLCRCKATGGRGDEKKKRIFAFRKGKT
GFQGPHPEVRVRGSIAHTATLGQVKISARKGLPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20652; Mature: 20652

Theoretical pI: Translated: 12.01; Mature: 12.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSLASVVRDVVAIPLRGSIPCNEPPRAHRGGNPRKVAIPLRGSIPCNLNQKALWAAAY
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
AVASQSPYGAQSLATRLASPSPLSLTSRNPLTGLNPLQRYPPKNPVLDGAARGGFVRKMK
HHHCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHH
LGICTRRITGVFGGLCRCKATGGRGDEKKKRIFAFRKGKTGFQGPHPEVRVRGSIAHTAT
HHHHHHHHHHHHCCCEEEEECCCCCCHHHHEEEEEECCCCCCCCCCCCEEEECCEECEEE
LGQVKISARKGLPD
ECEEEEECCCCCCC
>Mature Secondary Structure
MKTSLASVVRDVVAIPLRGSIPCNEPPRAHRGGNPRKVAIPLRGSIPCNLNQKALWAAAY
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
AVASQSPYGAQSLATRLASPSPLSLTSRNPLTGLNPLQRYPPKNPVLDGAARGGFVRKMK
HHHCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHH
LGICTRRITGVFGGLCRCKATGGRGDEKKKRIFAFRKGKTGFQGPHPEVRVRGSIAHTAT
HHHHHHHHHHHHCCCEEEEECCCCCCHHHHEEEEEECCCCCCCCCCCCEEEECCEECEEE
LGQVKISARKGLPD
ECEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA