Click here to switch to the map view.

The map label for this gene is 55980853

Identifier: 55980853

GI number: 55980853

Start: 841486

End: 842001

Strand: Reverse

Name: 55980853

Synonym: TTHA0884

Alternate gene names: NA

Gene position: 842001-841486 (Counterclockwise)

Preceding gene: 55980854

Following gene: 55980852

Centisome position: 45.52

GC content: 67.83

Gene sequence:

>516_bases
ATGGCGGCCCCACTTCGGATCCAGCTGACCCCTGAGGAGGACCGGCTCCTCCTGGAGCTCTCCCTGGACCCAAGGACCCA
CAAGAAGACCCGCCTGTGGGCCATGATGGTCCGCCTGGCGGCCGAGGGCTGGACCGCTCCAAAGATCGCCCAGCACTTCC
ACAAGGACCGCACCACGGTCTACCTCGTCCTCCGGCGCTTCTTGAGGGAGGGTCTCCAGGGCCTCGCCTACCGCAAACCC
CCGGGAGCTCCCAGGAAGTTCACCCCCGAGATGGCCGCCTTCGTGGAGGAAAGGCTGGCCGAGGATAGGGTCTGGACCGC
CCCGCAGCTTGCGGCAGCCCTAGCCGAGCGCTTCGGGGTCCGCCTGGCCCCCAAGGTGGTGGCCCGGCACCTGAGGGCCA
TGGGGTACGTGTGGCGACGGACGCGGTACGTGCCTCTGGGAAAGCCCACGGAGGAAGAGGTGAAGGCTTTCGCGGAGGAG
GAAGAGGAAGCAAAAAGGGGGCGGAGGAGGGGGTGA

Upstream 100 bases:

>100_bases
CTTCCACCCAAGCCGGAAAAGCCTACAGGAAATCGGCCGGGCCCTCCGGGCCGGGCTTACCACGTCCCCGTGCTAAGTGC
CAACCCCTTATCATCTCAAC

Downstream 100 bases:

>100_bases
TGGAGGTGGGGTACCTGGATGAGAGCGGGTTTTCCCTGACCCTTCCCCCTACCTACGCCTGGGGTCGGAGGGGGGAGGCC
AAGGGGGTGCCCCGGGCCTG

Product: transposase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MAAPLRIQLTPEEDRLLLELSLDPRTHKKTRLWAMMVRLAAEGWTAPKIAQHFHKDRTTVYLVLRRFLREGLQGLAYRKP
PGAPRKFTPEMAAFVEERLAEDRVWTAPQLAAALAERFGVRLAPKVVARHLRAMGYVWRRTRYVPLGKPTEEEVKAFAEE
EEEAKRGRRRG

Sequences:

>Translated_171_residues
MAAPLRIQLTPEEDRLLLELSLDPRTHKKTRLWAMMVRLAAEGWTAPKIAQHFHKDRTTVYLVLRRFLREGLQGLAYRKP
PGAPRKFTPEMAAFVEERLAEDRVWTAPQLAAALAERFGVRLAPKVVARHLRAMGYVWRRTRYVPLGKPTEEEVKAFAEE
EEEAKRGRRRG
>Mature_170_residues
AAPLRIQLTPEEDRLLLELSLDPRTHKKTRLWAMMVRLAAEGWTAPKIAQHFHKDRTTVYLVLRRFLREGLQGLAYRKPP
GAPRKFTPEMAAFVEERLAEDRVWTAPQLAAALAERFGVRLAPKVVARHLRAMGYVWRRTRYVPLGKPTEEEVKAFAEEE
EEAKRGRRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19822; Mature: 19691

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPLRIQLTPEEDRLLLELSLDPRTHKKTRLWAMMVRLAAEGWTAPKIAQHFHKDRTTV
CCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
YLVLRRFLREGLQGLAYRKPPGAPRKFTPEMAAFVEERLAEDRVWTAPQLAAALAERFGV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
RLAPKVVARHLRAMGYVWRRTRYVPLGKPTEEEVKAFAEEEEEAKRGRRRG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AAPLRIQLTPEEDRLLLELSLDPRTHKKTRLWAMMVRLAAEGWTAPKIAQHFHKDRTTV
CCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHH
YLVLRRFLREGLQGLAYRKPPGAPRKFTPEMAAFVEERLAEDRVWTAPQLAAALAERFGV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
RLAPKVVARHLRAMGYVWRRTRYVPLGKPTEEEVKAFAEEEEEAKRGRRRG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA