Definition | Thermus thermophilus HB8 chromosome, complete genome. |
---|---|
Accession | NC_006461 |
Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is ltaA [H]
Identifier: 55980849
GI number: 55980849
Start: 837937
End: 839109
Strand: Reverse
Name: ltaA [H]
Synonym: TTHA0880
Alternate gene names: 55980849
Gene position: 839109-837937 (Counterclockwise)
Preceding gene: 55980851
Following gene: 55980848
Centisome position: 45.36
GC content: 72.63
Gene sequence:
>1173_bases GTGTTTCGCTTCCTCCCGTGGCGGCGGGAAGGGCTTTCCGCCCTTCTCCGCCTCGTCCTCGTGGTGGGCCTCCTGGAGGG GGTGCGGAGCGGCTACTTCGCCGGGCTGCTCCCCTTTTACGCCCCGGAGCACCTGGGGCTGGGGCCCGCCGCCTTCACCC TGGCCTTTACCCTGCACCAGCTCGCGGAAAACCTCTCCAAGGCCGCAGGGGGGCTCCTGGCGGAGCGGCTCGGCTACGGG CTCACGGTGACCCTGGCCGCCGCCACGGGCCTCCTCGCCCTCCTCCTCACCCCAAGGGCGGACTCGGCCTGGATCCTTTG GACCCTCGGGGCCCTATGGGGCCTCACCTTCTCCTCCCTCTACCCCGGCCTCATGACCCTGGCGAGCCGCATCGCCCGCC CCGGGATGGACGCCCGGGCCCTGGCCTTCACCCTGAGCCTGGTGATGCCCTGGGTGGGGCTCGGCCTCGTGGGGGTGGGC CAGGTGGCCCAAAGGCACCCCCTCCAGGCCCTCTACCTCCTCCTCGCCGCCCAAGGGCTCGCCCTCCTCGTGGCCTTAAG CCTGGTGCGCTTCCGCATCCCCGTCCCGCCCCCCTCCAGGGAGCGCTACCCCCTTTACCGCCTCCTCCTCTTCGTGCCCG CGGCCTTCGGCCAAACCTTCGCCCCGGGGCTCGTCTCCCTCTTCCTCCTGCGCTTCGCCAAGGAGGAGCTCGGCCTCGAG CCCCTGGCCCTGGGGGGCCTCCTCGTCCTGGGGGGCGGGGCGGCCTTCCTCCTCCTCCCCTTCACGGGCCGCCTGGTGGA CCGGAGGGGCTACCAGGCGGCCCTCGTCCTCGGGCTTTTCCTCCTCGCCCTGGTCATGGCCCGGCTCGGCACCGGGCCCC ACCCCTACGAGCTTCCCGCCGCCGCCCTCCTTGGGGGCCTCGGGTTCAGCCTCTTCCTCCCCGGGTGGAACGGGCTTCTG GCCAAAAACCTGCCCCAGGAGAACCGGGCCGCCATCTGGGGTAGCCTCATGACCGTGGAGGGGCTCGGCCTCGCCCTGGG CCCGGTGGCGGGCGGGCTCTTGTGGGAGGCCTTCGGCCTCCGGGCGCCCTTTCTCGCGGGCTCGGGCATCTTCCTGGCCC TTAGCCTCCTCTACCTCCTCCTCTTCCGCGTGCGCGGGCTCTGGAGGCGGTGA
Upstream 100 bases:
>100_bases GGAAGGGTCTGGGCCAAGACCGCCTCCAGGGCGGAGGGCAGGTAGGCCTCCTCGTTCCGGGCGGGAATCACCACGCTGAC GCGCACGGGTATACTCTAGC
Downstream 100 bases:
>100_bases TGGTGGAGCTTTTCGGCGCCGTTCTCCTCCTCTTTGGCCTCTCCGACCTCCTCTTCCGCTTCCTGGGCTTAGGGGCCTAC GCCCACGGAAGCCGGCGGGA
Product: multidrug resistance protein-like protein
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: Lipoteichoic acid protein A [H]
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MFRFLPWRREGLSALLRLVLVVGLLEGVRSGYFAGLLPFYAPEHLGLGPAAFTLAFTLHQLAENLSKAAGGLLAERLGYG LTVTLAAATGLLALLLTPRADSAWILWTLGALWGLTFSSLYPGLMTLASRIARPGMDARALAFTLSLVMPWVGLGLVGVG QVAQRHPLQALYLLLAAQGLALLVALSLVRFRIPVPPPSRERYPLYRLLLFVPAAFGQTFAPGLVSLFLLRFAKEELGLE PLALGGLLVLGGGAAFLLLPFTGRLVDRRGYQAALVLGLFLLALVMARLGTGPHPYELPAAALLGGLGFSLFLPGWNGLL AKNLPQENRAAIWGSLMTVEGLGLALGPVAGGLLWEAFGLRAPFLAGSGIFLALSLLYLLLFRVRGLWRR
Sequences:
>Translated_390_residues MFRFLPWRREGLSALLRLVLVVGLLEGVRSGYFAGLLPFYAPEHLGLGPAAFTLAFTLHQLAENLSKAAGGLLAERLGYG LTVTLAAATGLLALLLTPRADSAWILWTLGALWGLTFSSLYPGLMTLASRIARPGMDARALAFTLSLVMPWVGLGLVGVG QVAQRHPLQALYLLLAAQGLALLVALSLVRFRIPVPPPSRERYPLYRLLLFVPAAFGQTFAPGLVSLFLLRFAKEELGLE PLALGGLLVLGGGAAFLLLPFTGRLVDRRGYQAALVLGLFLLALVMARLGTGPHPYELPAAALLGGLGFSLFLPGWNGLL AKNLPQENRAAIWGSLMTVEGLGLALGPVAGGLLWEAFGLRAPFLAGSGIFLALSLLYLLLFRVRGLWRR >Mature_390_residues MFRFLPWRREGLSALLRLVLVVGLLEGVRSGYFAGLLPFYAPEHLGLGPAAFTLAFTLHQLAENLSKAAGGLLAERLGYG LTVTLAAATGLLALLLTPRADSAWILWTLGALWGLTFSSLYPGLMTLASRIARPGMDARALAFTLSLVMPWVGLGLVGVG QVAQRHPLQALYLLLAAQGLALLVALSLVRFRIPVPPPSRERYPLYRLLLFVPAAFGQTFAPGLVSLFLLRFAKEELGLE PLALGGLLVLGGGAAFLLLPFTGRLVDRRGYQAALVLGLFLLALVMARLGTGPHPYELPAAALLGGLGFSLFLPGWNGLL AKNLPQENRAAIWGSLMTVEGLGLALGPVAGGLLWEAFGLRAPFLAGSGIFLALSLLYLLLFRVRGLWRR
Specific function: Probable permease that is required for glycolipid anchoring of LTA. May facilitate the transport of diglucosyl- diacylglycerol (Glc2-DAG) from the inner to the outer leaflet of the cytoplasmic membrane, delivering Glc2-DAG as a substrate for LTA synthesis
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LtaA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41674; Mature: 41674
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFLPWRREGLSALLRLVLVVGLLEGVRSGYFAGLLPFYAPEHLGLGPAAFTLAFTLHQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LAENLSKAAGGLLAERLGYGLTVTLAAATGLLALLLTPRADSAWILWTLGALWGLTFSSL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH YPGLMTLASRIARPGMDARALAFTLSLVMPWVGLGLVGVGQVAQRHPLQALYLLLAAQGL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH ALLVALSLVRFRIPVPPPSRERYPLYRLLLFVPAAFGQTFAPGLVSLFLLRFAKEELGLE HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC PLALGGLLVLGGGAAFLLLPFTGRLVDRRGYQAALVLGLFLLALVMARLGTGPHPYELPA CHHHCCEEEECCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH AALLGGLGFSLFLPGWNGLLAKNLPQENRAAIWGSLMTVEGLGLALGPVAGGLLWEAFGL HHHHHHCCHHEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC RAPFLAGSGIFLALSLLYLLLFRVRGLWRR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFRFLPWRREGLSALLRLVLVVGLLEGVRSGYFAGLLPFYAPEHLGLGPAAFTLAFTLHQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LAENLSKAAGGLLAERLGYGLTVTLAAATGLLALLLTPRADSAWILWTLGALWGLTFSSL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH YPGLMTLASRIARPGMDARALAFTLSLVMPWVGLGLVGVGQVAQRHPLQALYLLLAAQGL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH ALLVALSLVRFRIPVPPPSRERYPLYRLLLFVPAAFGQTFAPGLVSLFLLRFAKEELGLE HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC PLALGGLLVLGGGAAFLLLPFTGRLVDRRGYQAALVLGLFLLALVMARLGTGPHPYELPA CHHHCCEEEECCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH AALLGGLGFSLFLPGWNGLLAKNLPQENRAAIWGSLMTVEGLGLALGPVAGGLLWEAFGL HHHHHHCCHHEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC RAPFLAGSGIFLALSLLYLLLFRVRGLWRR CCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA