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The map label for this gene is 55980840

Identifier: 55980840

GI number: 55980840

Start: 830118

End: 830936

Strand: Reverse

Name: 55980840

Synonym: TTHA0871

Alternate gene names: NA

Gene position: 830936-830118 (Counterclockwise)

Preceding gene: 55980841

Following gene: 55980839

Centisome position: 44.92

GC content: 76.19

Gene sequence:

>819_bases
ATGCGGCGGCCTTCTCCCCCGGCGGAGGGCGAGGCCCAGACCGGTCCCCTCATCCTCTACAGCCTCCTCACAGGAGGGCT
TGCGGGCGGCGCGGCCCTCCTCGCCAGCCTGGCCCTAAAGGCGGTGGAGGCGCGGGTGGGCGGCCTCCTCGGGTACCTTC
CCCCTGGCCCCCCCGGGGAGGGCGGGCTCGGCCAGGCCTTCACGGGCCCCTCCTCCCCCCTCCTCCCCCTCCTCCTTCTC
CCCGCCCTCTTCGCCCTTTCCGGCTGGCTGGCCAGCCTTCCCGGGGCCTTTCCCCGGGCCCGGGCCTACCTCGCCGCCCT
GGTCCAGCTCGGGGCCTACTCCCCCCTGGGCCGGGAGGGGCTTTTCGGCGGCCTGGGCCTGTGGGTGGGGGAGGTCTTGG
GGAAGCGGTTTTCCCGCATCGGTCGGGTCCTGGCCTTCGCGGGCTTAGCGGCGGGGCTTGGGGCGAGCCTCCACGCCCCC
GTGGCCGGGGCCCTCCTCGCCACGGAGATGCGCTACCGGGGGCTCCGCCTCGAGGCCCAGGCCCTGGCCCCCGCCCTCCT
CGGGGCCCTCGCCGGCTTCACCGTCTACGGGGCCCTCCTGGGCTACGCCCCCTTGGTCCCGGTCCGGGCGGAGGCCTCCT
GGGGCGCCCTGCCCCTGGGCTTCGGCCTTGGGCCTCGGGGCCGCCCTTCTCGGCACCCTCTTGGCTCCAAGGGGCCGGGC
TTTTGGAGCGGGGGTCTTCCCGCCTTTCCCTCCCCTTGCGCCACGGCCTTTTGGGCCTCGCCCTGGGCCTCGCCCTCCTC
CTCGCCCCCGAGGCCCTAG

Upstream 100 bases:

>100_bases
TCCTGGTGCGGGCCCTCACCCGGGGGGGGTACCGGGCCTTGGGCCTCCCCACGCCCAGGCTCACCCGGGGAACGCCCCTT
TCTCTGGTACACTTCCTGTG

Downstream 100 bases:

>100_bases
GCCAGGGGACGGGCTGGCTTGCCCTGGCCACCACCCCCCTTCTCTTCCCCGAGGCGGTCCTCTACCTCCTCCTGGCCAAG
GGGCTCCTCCTCGTCCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRRPSPPAEGEAQTGPLILYSLLTGGLAGGAALLASLALKAVEARVGGLLGYLPPGPPGEGGLGQAFTGPSSPLLPLLLL
PALFALSGWLASLPGAFPRARAYLAALVQLGAYSPLGREGLFGGLGLWVGEVLGKRFSRIGRVLAFAGLAAGLGASLHAP
VAGALLATEMRYRGLRLEAQALAPALLGALAGFTVYGALLGYAPLVPVRAEASWGALPLGFGLGPRGRPSRHPLGSKGPG
FWSGGLPAFPSPCATAFWASPWASPSSSPPRP

Sequences:

>Translated_272_residues
MRRPSPPAEGEAQTGPLILYSLLTGGLAGGAALLASLALKAVEARVGGLLGYLPPGPPGEGGLGQAFTGPSSPLLPLLLL
PALFALSGWLASLPGAFPRARAYLAALVQLGAYSPLGREGLFGGLGLWVGEVLGKRFSRIGRVLAFAGLAAGLGASLHAP
VAGALLATEMRYRGLRLEAQALAPALLGALAGFTVYGALLGYAPLVPVRAEASWGALPLGFGLGPRGRPSRHPLGSKGPG
FWSGGLPAFPSPCATAFWASPWASPSSSPPRP
>Mature_272_residues
MRRPSPPAEGEAQTGPLILYSLLTGGLAGGAALLASLALKAVEARVGGLLGYLPPGPPGEGGLGQAFTGPSSPLLPLLLL
PALFALSGWLASLPGAFPRARAYLAALVQLGAYSPLGREGLFGGLGLWVGEVLGKRFSRIGRVLAFAGLAAGLGASLHAP
VAGALLATEMRYRGLRLEAQALAPALLGALAGFTVYGALLGYAPLVPVRAEASWGALPLGFGLGPRGRPSRHPLGSKGPG
FWSGGLPAFPSPCATAFWASPWASPSSSPPRP

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27390; Mature: 27390

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRPSPPAEGEAQTGPLILYSLLTGGLAGGAALLASLALKAVEARVGGLLGYLPPGPPGE
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GGLGQAFTGPSSPLLPLLLLPALFALSGWLASLPGAFPRARAYLAALVQLGAYSPLGREG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LFGGLGLWVGEVLGKRFSRIGRVLAFAGLAAGLGASLHAPVAGALLATEMRYRGLRLEAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH
ALAPALLGALAGFTVYGALLGYAPLVPVRAEASWGALPLGFGLGPRGRPSRHPLGSKGPG
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FWSGGLPAFPSPCATAFWASPWASPSSSPPRP
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRRPSPPAEGEAQTGPLILYSLLTGGLAGGAALLASLALKAVEARVGGLLGYLPPGPPGE
CCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GGLGQAFTGPSSPLLPLLLLPALFALSGWLASLPGAFPRARAYLAALVQLGAYSPLGREG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LFGGLGLWVGEVLGKRFSRIGRVLAFAGLAAGLGASLHAPVAGALLATEMRYRGLRLEAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH
ALAPALLGALAGFTVYGALLGYAPLVPVRAEASWGALPLGFGLGPRGRPSRHPLGSKGPG
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
FWSGGLPAFPSPCATAFWASPWASPSSSPPRP
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA