| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yeaH [C]
Identifier: 55980811
GI number: 55980811
Start: 807052
End: 808107
Strand: Reverse
Name: yeaH [C]
Synonym: TTHA0842
Alternate gene names: 55980811
Gene position: 808107-807052 (Counterclockwise)
Preceding gene: 55980812
Following gene: 55980810
Centisome position: 43.69
GC content: 69.6
Gene sequence:
>1056_bases ATGCCCGAGGGGATCCTGCCCATTGAGCGCGACCTCCTCCGCTTCAAGGAGATCGTGCGGGGGGAGGTGAAGAAGCGCGT GCGGGAGTTCCTCACCCGGGAGGAGCTCTTCGGCCAGGTGGAAGGCCGCCTCGTCTCCATCCCCCTGCCCCAGCTGGAGA TCCCCAAGATCGTCCACGGGGAGCCCCTAGGGGAAGGCCTGGGCCTCGGGGGGCCCGGGGAGGAGGCCTTGGGCCCGGGG GGGCACATTCCGGTGGCCGAGCTGGAGCTGGAGGAGTTTTTGGACCTCGTGGGGGAGGCCCTGAGGCTTCCCCGCCTAAG GCCCAAGGGGGAGGGGGAGGTCACGGAGGAGGCCCTGCGCCACACCACCATCGCCCGCAAGGGGCCGAGGGGGCTCCGCC ACGTGCGCCGCACCCTCAAGGAGAGCCTGAAGAGGGCCCTGCAAAGCGGGGAGTACCGCCCCGAAGACCCCCTCCTCGTC CCCGAGCGGGAGGACCTGCGCTACAAGGCCCCGAGGCGAAAGCCCATCCCCCACGCCCAGGCGGTGGTCCTCTTCGCCCT GGACGTCTCCGGGAGCATGCGGGAAGAGGAGCTTAAGCTCGTCAAGACCCTCTCCTTCTGGATCACCCTCTGGATCAAGC GGCACTTTCCCAGGCTGGAAAGGCGCTACCTCCTCCACGACGCCGAGGCCTGGGAGGTCCCCGAGGAGGAGTTCTTCAAG GCCCGGGAGGGCGGGGGAACGCGGATCTCCAGCGCCCTCCTCCTGGCGGAAGAGATCCTCAAGGCCTACCCCGAGGCCTT CTACAACCGCTACCTCTTCCACTTCTCCGACGGGGAGAACTGGCAGGGGGACACGCCCTTGGCCCTCGAGGCCCTAAGGC GCCTCCTCCCCTCCCTCGCCCTCTACGGGTACGCCCAGGTGGAGAGCCCCTACGGCCAGGGGCACTTCCTGGAGGAGGTG CAGGAGGCCCTGGGAGGCAGGGAGGGGGTCGCCCTCGCCGCGGTGCGGGGCCGGGAGGACCTGCCCGTGGCCTTGAAGCG GCTTCTCGGAGGTTGA
Upstream 100 bases:
>100_bases GACGTGGTCAAGGCCCGGCTCATCCGGGACTACGGCTACTGCGAGCACTGCGCGAGCGGCGTCTTGGAGTTCGCCGCCTC CCTCTTCGCCCGGAGCTAGG
Downstream 100 bases:
>100_bases AATGGAGCGGGAACTCGCCCACTGGGTGGAGCGCCTCAGGGAGCGGGCGGAGGCCGAGGGGCTTTCCTTTCCCCCCGTGG CCTTCCAGGAGGTGGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MPEGILPIERDLLRFKEIVRGEVKKRVREFLTREELFGQVEGRLVSIPLPQLEIPKIVHGEPLGEGLGLGGPGEEALGPG GHIPVAELELEEFLDLVGEALRLPRLRPKGEGEVTEEALRHTTIARKGPRGLRHVRRTLKESLKRALQSGEYRPEDPLLV PEREDLRYKAPRRKPIPHAQAVVLFALDVSGSMREEELKLVKTLSFWITLWIKRHFPRLERRYLLHDAEAWEVPEEEFFK AREGGGTRISSALLLAEEILKAYPEAFYNRYLFHFSDGENWQGDTPLALEALRRLLPSLALYGYAQVESPYGQGHFLEEV QEALGGREGVALAAVRGREDLPVALKRLLGG
Sequences:
>Translated_351_residues MPEGILPIERDLLRFKEIVRGEVKKRVREFLTREELFGQVEGRLVSIPLPQLEIPKIVHGEPLGEGLGLGGPGEEALGPG GHIPVAELELEEFLDLVGEALRLPRLRPKGEGEVTEEALRHTTIARKGPRGLRHVRRTLKESLKRALQSGEYRPEDPLLV PEREDLRYKAPRRKPIPHAQAVVLFALDVSGSMREEELKLVKTLSFWITLWIKRHFPRLERRYLLHDAEAWEVPEEEFFK AREGGGTRISSALLLAEEILKAYPEAFYNRYLFHFSDGENWQGDTPLALEALRRLLPSLALYGYAQVESPYGQGHFLEEV QEALGGREGVALAAVRGREDLPVALKRLLGG >Mature_350_residues PEGILPIERDLLRFKEIVRGEVKKRVREFLTREELFGQVEGRLVSIPLPQLEIPKIVHGEPLGEGLGLGGPGEEALGPGG HIPVAELELEEFLDLVGEALRLPRLRPKGEGEVTEEALRHTTIARKGPRGLRHVRRTLKESLKRALQSGEYRPEDPLLVP EREDLRYKAPRRKPIPHAQAVVLFALDVSGSMREEELKLVKTLSFWITLWIKRHFPRLERRYLLHDAEAWEVPEEEFFKA REGGGTRISSALLLAEEILKAYPEAFYNRYLFHFSDGENWQGDTPLALEALRRLLPSLALYGYAQVESPYGQGHFLEEVQ EALGGREGVALAAVRGREDLPVALKRLLGG
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=311, Percent_Identity=29.2604501607717, Blast_Score=125, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014230 - InterPro: IPR006698 - InterPro: IPR002035 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 39719; Mature: 39588
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEGILPIERDLLRFKEIVRGEVKKRVREFLTREELFGQVEGRLVSIPLPQLEIPKIVHG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC EPLGEGLGLGGPGEEALGPGGHIPVAELELEEFLDLVGEALRLPRLRPKGEGEVTEEALR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH HTTIARKGPRGLRHVRRTLKESLKRALQSGEYRPEDPLLVPEREDLRYKAPRRKPIPHAQ HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHH AVVLFALDVSGSMREEELKLVKTLSFWITLWIKRHFPRLERRYLLHDAEAWEVPEEEFFK EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHH AREGGGTRISSALLLAEEILKAYPEAFYNRYLFHFSDGENWQGDTPLALEALRRLLPSLA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH LYGYAQVESPYGQGHFLEEVQEALGGREGVALAAVRGREDLPVALKRLLGG HHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure PEGILPIERDLLRFKEIVRGEVKKRVREFLTREELFGQVEGRLVSIPLPQLEIPKIVHG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCC EPLGEGLGLGGPGEEALGPGGHIPVAELELEEFLDLVGEALRLPRLRPKGEGEVTEEALR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH HTTIARKGPRGLRHVRRTLKESLKRALQSGEYRPEDPLLVPEREDLRYKAPRRKPIPHAQ HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHH AVVLFALDVSGSMREEELKLVKTLSFWITLWIKRHFPRLERRYLLHDAEAWEVPEEEFFK EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHH AREGGGTRISSALLLAEEILKAYPEAFYNRYLFHFSDGENWQGDTPLALEALRRLLPSLA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH LYGYAQVESPYGQGHFLEEVQEALGGREGVALAAVRGREDLPVALKRLLGG HHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA