| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is bdbD [H]
Identifier: 55980792
GI number: 55980792
Start: 787610
End: 788245
Strand: Reverse
Name: bdbD [H]
Synonym: TTHA0823
Alternate gene names: 55980792
Gene position: 788245-787610 (Counterclockwise)
Preceding gene: 55980793
Following gene: 55980791
Centisome position: 42.61
GC content: 70.13
Gene sequence:
>636_bases ATGCCGCGCGCGATCGTTCTCGTGGTGCTGGGACTCGCCCTCCTGGGCCTCGGCTGGATCCTCTGGGGGCCCAAGGGCAA GGCAGGGCTGGACCCGGCGGAAGGGGCCCGTTTCGCCCTGGGGCGGGAGGACGCCCCCGTCGTGGTCGTGGACTTCTCCA ACTACCTCTGCCCCCACTGCCAAAACCACGCCCTAAACGTCCTCCCCCGGCTCAAGGCGGAGTACATCGACACGGGGAAG GTGCGCTACCTCTTCCGCGACTTCCCCTTCCCCGGGCAGGCGAACGTGATCCGGGCGAGCGAGGCCGCGGCCTGCGCCGC CGAGCAGGGACGCTACTACGATTACCACGAGGTCCTCTTCCGGGCGGCGGCGGGCTGGGGAAACCTCACGGGGGAGGCCT TGGACCGGTACCTCGTGGACCTGGCGGGCCAGATCGGCCTGGAGGAAGGGGCCTTCGCGGCCTGCCTCGCCTCGGGCCGG CACCGGGAGGAGGTCCTCGCCGACCAGAAGCTCGCCACCGACCTCGGCCTCACCGGCACCCCCACCTTCTTCATCGCCGG GGAAAAGCACACGGGCTTCCTCCCCTACGAGGAGTGGAAGCGGCTCCTGGACGAGGCCTTGGCCAAGGCAGAGTAG
Upstream 100 bases:
>100_bases TTGGGCCAGAACGGCTGGCCCGGGGAAGCCCCCCGGGAACTTTTTCCGGGGGGTGGGACGACGCCCTCCGCGGCCAGGCC GCACGTGGTAGAGTAACCCC
Downstream 100 bases:
>100_bases CGCCTTAAGGAGGCCGGGAAAGGCGTCTGGTACCCTGAAAGCGTGGAAGCGCTTTGGGTGACCGCCGCCTTCGCCTTGGG CCTCCTGGCGAGCCGCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Disulfide oxidoreductase D; Thiol-disulfide oxidoreductase D [H]
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHCQNHALNVLPRLKAEYIDTGK VRYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLFRAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGR HREEVLADQKLATDLGLTGTPTFFIAGEKHTGFLPYEEWKRLLDEALAKAE
Sequences:
>Translated_211_residues MPRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHCQNHALNVLPRLKAEYIDTGK VRYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLFRAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGR HREEVLADQKLATDLGLTGTPTFFIAGEKHTGFLPYEEWKRLLDEALAKAE >Mature_210_residues PRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHCQNHALNVLPRLKAEYIDTGKV RYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLFRAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGRH REEVLADQKLATDLGLTGTPTFFIAGEKHTGFLPYEEWKRLLDEALAKAE
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioredoxin family. DsbA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 23017; Mature: 22885
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHC CCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCC QNHALNVLPRLKAEYIDTGKVRYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLF CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHH RAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGRHREEVLADQKLATDLGLTGT HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC PTFFIAGEKHTGFLPYEEWKRLLDEALAKAE CEEEEECCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PRAIVLVVLGLALLGLGWILWGPKGKAGLDPAEGARFALGREDAPVVVVDFSNYLCPHC CHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCCC QNHALNVLPRLKAEYIDTGKVRYLFRDFPFPGQANVIRASEAAACAAEQGRYYDYHEVLF CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHCCCCCCHHHHHH RAAAGWGNLTGEALDRYLVDLAGQIGLEEGAFAACLASGRHREEVLADQKLATDLGLTGT HHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC PTFFIAGEKHTGFLPYEEWKRLLDEALAKAE CEEEEECCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12721629 [H]