| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is yunF [H]
Identifier: 55980727
GI number: 55980727
Start: 724526
End: 725437
Strand: Reverse
Name: yunF [H]
Synonym: TTHA0758
Alternate gene names: 55980727
Gene position: 725437-724526 (Counterclockwise)
Preceding gene: 55980728
Following gene: 55980726
Centisome position: 39.22
GC content: 68.09
Gene sequence:
>912_bases GTGGCCGAGATCCGCGTGGGCACGGCCAGCTGGACCGACCCCACCCTCCTCGCCTCCGGCTGGTACCCCCCCGGGGTGAG GAACCACCCGGAAAGGCGCCTCCGCTACTACGCCCAGCACTTTGATACCGTGGAGGTGGACAGCACCTTCTACGCCCTCC CCCGCCTCGAGGTGGTGCGGAAGTGGGCGGAGAGGACCCCTGAGGGCTTCCTCTTCCACGTCAAGGCCTACTCCGCCTTC ACCGGGCACGGCCTCGAGGCCAGTGCCCTCCCCAAGGACCTGCAGGCCCTCCTCCCCCAAAAGGAGGGCCACCTCTCCCA GCGGGAGGTGCCGGAGGAGGTGGTGGAGGAAGCCTGGAACCGCTTCTTTGCGTCCCTCGCCCCCTTAAGGGAGGCAGGGA AACTGGGCTACCTCCACTTCGGCCTCCCCCCCTGGACCGAGCCCAAGCCCCGGAGCTTCCGGTACCTGGAGCGGCTGGCG GAGAGAACCCAGGGCTACCTGGTGGCCGTGGAGTTCCGCAACCCCAGGTGGTACACCGCGTGGGGCTTTGTGAAGCGGGA GCTCATGCGCCTCGGCCTGGCCCACGTGAGCGTGGACGCCCCGCCCCACCCCGAGGCCCCGCCCAGGGTCTTGGAGCCCA CCCGGGAGGTGGCCGTCCTCCGCTGCCACGGGAGGAACGCCGAAACCTGGAAGGGGCCTCACCAAAAGCCCTACGAGCGC TTCAACTGGCGCTACTCCGAGGAGGAGCTTTTGGACCTGGCGGAGGCCACCCGCACCCTGGCCGCTCAAGCGGAAAGGGT CTTCGTCATCTTCAACAACAACTACGGCACCCAGGGGGTGGAGGCCGCCTTGGGACTCAAGCGCCTTTTGGGTCTTGGGA AGCCTCCCTGGGCCGAAGGGCCATTTTCTTAG
Upstream 100 bases:
>100_bases CTACCGGGAGATCAAAAGCCCCCACGGGCACGACGCCTTCCTCATAGAGACCGACCAGGTGGAGGAGATCCTGGACGCCT TCCTCCCGTAGACTGGGGCC
Downstream 100 bases:
>100_bases ACCAAGTCCAGGACATTTGTCCCCGGGACCGCCGCCTAGACTCCTCTTCGCATGGAGCTAGGTTTGCTTTCGGAAAGAAG AGGCCTTTCCAGGGAGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVRKWAERTPEGFLFHVKAYSAF TGHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWNRFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLA ERTQGYLVAVEFRNPRWYTAWGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYER FNWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEGPFS
Sequences:
>Translated_303_residues MAEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVRKWAERTPEGFLFHVKAYSAF TGHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWNRFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLA ERTQGYLVAVEFRNPRWYTAWGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYER FNWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEGPFS >Mature_302_residues AEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVRKWAERTPEGFLFHVKAYSAFT GHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWNRFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLAE RTQGYLVAVEFRNPRWYTAWGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYERF NWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEGPFS
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 34754; Mature: 34623
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVR CCEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH KWAERTPEGFLFHVKAYSAFTGHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWN HHHHCCCCCEEEEEEEECHHCCCCCCHHCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHH RFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLAERTQGYLVAVEFRNPRWYTA HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEH WGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYER HHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH FNWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEG CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC PFS CCC >Mature Secondary Structure AEIRVGTASWTDPTLLASGWYPPGVRNHPERRLRYYAQHFDTVEVDSTFYALPRLEVVR CEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH KWAERTPEGFLFHVKAYSAFTGHGLEASALPKDLQALLPQKEGHLSQREVPEEVVEEAWN HHHHCCCCCEEEEEEEECHHCCCCCCHHCCHHHHHHHCCCCCCCCCHHCCHHHHHHHHHH RFFASLAPLREAGKLGYLHFGLPPWTEPKPRSFRYLERLAERTQGYLVAVEFRNPRWYTA HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEH WGFVKRELMRLGLAHVSVDAPPHPEAPPRVLEPTREVAVLRCHGRNAETWKGPHQKPYER HHHHHHHHHHHHHHHEECCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHH FNWRYSEEELLDLAEATRTLAAQAERVFVIFNNNYGTQGVEAALGLKRLLGLGKPPWAEG CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC PFS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]