Click here to switch to the map view.

The map label for this gene is 55980702

Identifier: 55980702

GI number: 55980702

Start: 699691

End: 700125

Strand: Reverse

Name: 55980702

Synonym: TTHA0733

Alternate gene names: NA

Gene position: 700125-699691 (Counterclockwise)

Preceding gene: 55980705

Following gene: 55980701

Centisome position: 37.85

GC content: 70.8

Gene sequence:

>435_bases
ATGAACGGACCACCGCCCCCCCTGGTCCAGGAGCTGGCGGCGTTGGGGTACGCCTTGACCCACGCCCTCTACACCGAGGC
CAAGGAGCTCCTCGTCAAGGAGGGCCTCTCCCCGAGAAAGGCCCACCTCCTCGGCCTCCTGGCCAAGGGGGTGGACCTCC
CCTCCCAGCTCGCCGAGCTCCTCGAGGTCCACCCCTCCCAGGTCTCCCACCTCCTCGCCGCCTTGGAGGAGGAGGGCCTG
GTAAAGCGGAGCCCCGACCCCCAGGACCGCCGCAAGGTGAAGCTCTTCCTCACGCCCAAAGGGCGGGAGGCGGCGGCCCG
GACCGAGGCGCTTTGGCTCGCCGTCTTCGGCCGGAGGCTTGCCCGCCTCTCCCCGGAGGAGCAGGCCGCCTTCCTCCGGA
TCCTGCGCAAGCTCACGGAGGTGGAGGATGCGTAG

Upstream 100 bases:

>100_bases
GCCCTCGCCCGGGCATCCCCCGGGGCGAAACCCAGGCGCGCACAAGGCGGGCAGAGGTTGTCTTGACTAAATAGTTGACT
TGACTTAACCTTTTCCCGGT

Downstream 100 bases:

>100_bases
GCTTCTCCTCCTTCCCCTCCTCGCCCTCCCCGCCCTGGCCCAGTCCGCCCTAAGCCCACTCAAGGACCACCCCCTCCTCA
AGCAGGCGGAGGCCTACCTC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNGPPPPLVQELAALGYALTHALYTEAKELLVKEGLSPRKAHLLGLLAKGVDLPSQLAELLEVHPSQVSHLLAALEEEGL
VKRSPDPQDRRKVKLFLTPKGREAAARTEALWLAVFGRRLARLSPEEQAAFLRILRKLTEVEDA

Sequences:

>Translated_144_residues
MNGPPPPLVQELAALGYALTHALYTEAKELLVKEGLSPRKAHLLGLLAKGVDLPSQLAELLEVHPSQVSHLLAALEEEGL
VKRSPDPQDRRKVKLFLTPKGREAAARTEALWLAVFGRRLARLSPEEQAAFLRILRKLTEVEDA
>Mature_144_residues
MNGPPPPLVQELAALGYALTHALYTEAKELLVKEGLSPRKAHLLGLLAKGVDLPSQLAELLEVHPSQVSHLLAALEEEGL
VKRSPDPQDRRKVKLFLTPKGREAAARTEALWLAVFGRRLARLSPEEQAAFLRILRKLTEVEDA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15866; Mature: 15866

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGPPPPLVQELAALGYALTHALYTEAKELLVKEGLSPRKAHLLGLLAKGVDLPSQLAEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
LEVHPSQVSHLLAALEEEGLVKRSPDPQDRRKVKLFLTPKGREAAARTEALWLAVFGRRL
HHHCHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHH
ARLSPEEQAAFLRILRKLTEVEDA
HHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNGPPPPLVQELAALGYALTHALYTEAKELLVKEGLSPRKAHLLGLLAKGVDLPSQLAEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH
LEVHPSQVSHLLAALEEEGLVKRSPDPQDRRKVKLFLTPKGREAAARTEALWLAVFGRRL
HHHCHHHHHHHHHHHHHCCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHH
ARLSPEEQAAFLRILRKLTEVEDA
HHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA