| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980697
Identifier: 55980697
GI number: 55980697
Start: 692244
End: 692990
Strand: Reverse
Name: 55980697
Synonym: TTHA0728
Alternate gene names: NA
Gene position: 692990-692244 (Counterclockwise)
Preceding gene: 55980698
Following gene: 55980696
Centisome position: 37.46
GC content: 73.36
Gene sequence:
>747_bases GTGAGCGCGCGGCAGGTGGTCCTCGGGGTGGTCCTGGGGGCGGTGGCCCTCGCCGCCTTGGCCGCGGGGCTCGTCCTCTT CCTCTTCCGCCCCCTGAAGGCGGAGCCCGTGGCCCTGGACGCCCTAAAGGGCCTGAGGACCCGGGAGACCCCTTACGGCC TCGAGGTCCTCCCCCAGGCCCCCAAGGCCCTCCTCGCCTTCTACCCGGGGGCCCGGGTGGAGCCCTTGGCCTACGCCCCC GTCCTCGCCCCCCTCGTAGGAAATGGGTACCTGGTGGTCCTCCTCCGGGTGCCCCAGGGGATCGCCCTCCTCGGCCAGGA CCGGGCCCTGGAGGCGGGTCGGGCCCACCCCGGGCTTCCCTTGGTGGTGGGAGGGCACAGCCTGGGCGGGGTGGTGGCGG CGGGGGTGGCGGCCCGGGAAGGGCTTCCCCTCGTCCTCTTCGCCGCCTACCCCGAGGAAGACCTCTCCCAGGAGGCCTTC CCCACCCTCGCCCTCTACGGCACGGAAGACGGCCTCCTCCCCCCAAAGGAGGCCCGAAGGAAGGCGGAAAGGCTTCCCCG AAACGCCCGGGTGGTCTTCGTGGAGGGGCTGAACCACGCGGGCTTCGGGGCCTACGGCCCGCAAAGGGGGGACAGGCCCG CCACACGCCCCCGGGAGGCCCTGTGGGAAGAGGTCCGGGAGGAGGTCCTCCTTTTCCTCGAGGGCCTGGGGTGGGACACA CCTCCCTCCCCGAGGGCGTTACGCTAG
Upstream 100 bases:
>100_bases TCCTGGGGGGGATGCTCTCCTCCACCCTCCTCACCCTCTTCGTGGTCCCCGCCGCCTTCTTCGCGGTGGAGGGGCGCCTC GCGCGGAAGGGGGGAAAGGG
Downstream 100 bases:
>100_bases GGGCATGGACCGGACCCACGAGCGCGTCCTACAGGCCATGGCGGAGAACCTAGGGGAAGGCCTGCCCCGGGCCATCCCCC TCCTCGCGGAGAAGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSARQVVLGVVLGAVALAALAAGLVLFLFRPLKAEPVALDALKGLRTRETPYGLEVLPQAPKALLAFYPGARVEPLAYAP VLAPLVGNGYLVVLLRVPQGIALLGQDRALEAGRAHPGLPLVVGGHSLGGVVAAGVAAREGLPLVLFAAYPEEDLSQEAF PTLALYGTEDGLLPPKEARRKAERLPRNARVVFVEGLNHAGFGAYGPQRGDRPATRPREALWEEVREEVLLFLEGLGWDT PPSPRALR
Sequences:
>Translated_248_residues MSARQVVLGVVLGAVALAALAAGLVLFLFRPLKAEPVALDALKGLRTRETPYGLEVLPQAPKALLAFYPGARVEPLAYAP VLAPLVGNGYLVVLLRVPQGIALLGQDRALEAGRAHPGLPLVVGGHSLGGVVAAGVAAREGLPLVLFAAYPEEDLSQEAF PTLALYGTEDGLLPPKEARRKAERLPRNARVVFVEGLNHAGFGAYGPQRGDRPATRPREALWEEVREEVLLFLEGLGWDT PPSPRALR >Mature_247_residues SARQVVLGVVLGAVALAALAAGLVLFLFRPLKAEPVALDALKGLRTRETPYGLEVLPQAPKALLAFYPGARVEPLAYAPV LAPLVGNGYLVVLLRVPQGIALLGQDRALEAGRAHPGLPLVVGGHSLGGVVAAGVAAREGLPLVLFAAYPEEDLSQEAFP TLALYGTEDGLLPPKEARRKAERLPRNARVVFVEGLNHAGFGAYGPQRGDRPATRPREALWEEVREEVLLFLEGLGWDTP PSPRALR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26342; Mature: 26211
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARQVVLGVVLGAVALAALAAGLVLFLFRPLKAEPVALDALKGLRTRETPYGLEVLPQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEECCCC PKALLAFYPGARVEPLAYAPVLAPLVGNGYLVVLLRVPQGIALLGQDRALEAGRAHPGLP CHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCHHHHCCCCCCCCE LVVGGHSLGGVVAAGVAAREGLPLVLFAAYPEEDLSQEAFPTLALYGTEDGLLPPKEARR EEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCHHHCCEEEEEECCCCCCCCHHHHH KAERLPRNARVVFVEGLNHAGFGAYGPQRGDRPATRPREALWEEVREEVLLFLEGLGWDT HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PPSPRALR CCCCCCCC >Mature Secondary Structure SARQVVLGVVLGAVALAALAAGLVLFLFRPLKAEPVALDALKGLRTRETPYGLEVLPQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCEECCCC PKALLAFYPGARVEPLAYAPVLAPLVGNGYLVVLLRVPQGIALLGQDRALEAGRAHPGLP CHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEECCCHHHHCCCCCCCCE LVVGGHSLGGVVAAGVAAREGLPLVLFAAYPEEDLSQEAFPTLALYGTEDGLLPPKEARR EEECCCCHHHHHHHHHHHHCCCCEEEEEECCCHHCCHHHCCEEEEEECCCCCCCCHHHHH KAERLPRNARVVFVEGLNHAGFGAYGPQRGDRPATRPREALWEEVREEVLLFLEGLGWDT HHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PPSPRALR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA