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The map label for this gene is 54295549

Identifier: 54295549

GI number: 54295549

Start: 3006840

End: 3007157

Strand: Reverse

Name: 54295549

Synonym: lpl2636

Alternate gene names: NA

Gene position: 3007157-3006840 (Counterclockwise)

Preceding gene: 54295550

Following gene: 54295548

Centisome position: 89.88

GC content: 38.36

Gene sequence:

>318_bases
TTGTTGTCTCATTACACCAAGCATGTATTCATATGCACAAATCAGAAAGCACCGGGTAAGCAATGTTGTGCCAATTCCGG
TGGAGAAGAATTTTTTGATTTTATGAAATCAAAATTGTTAGAATTTGATTTACATGGCCCTGGAAAAATCCGGGTCAGCA
AATCAGGATGCCTTGGACGATGTAGCTCTGGTCCTTGCATCGTTATTTATCCAGAAGGAGTTTGGTATACTTATTCTTCC
TTTGAAGATATTGAACAAATCATCAGGTACCACTTAATTGATGGTAAGATAGTAGCGCCACTTCTGCTAGACAGATAA

Upstream 100 bases:

>100_bases
CCAAAGACGGGTGAAGAAATTCCTGTGGAAGCCAGAAGGGTTGTTACCTTTAAGCCAGGTTTAAAATTAAAAACGAAAAT
TGAAAAAATAGGAAAGTAGT

Downstream 100 bases:

>100_bases
TTATTTAGGGAAATAAACTTTTTTGTGCTTCCTGGCACGAAAAGGCTTTTGATAAAATTAAGCGTTGGTTAATTCTGAGC
GAGTAGTCAGGCCCAGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: 2FeCpFd [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MLSHYTKHVFICTNQKAPGKQCCANSGGEEFFDFMKSKLLEFDLHGPGKIRVSKSGCLGRCSSGPCIVIYPEGVWYTYSS
FEDIEQIIRYHLIDGKIVAPLLLDR

Sequences:

>Translated_105_residues
MLSHYTKHVFICTNQKAPGKQCCANSGGEEFFDFMKSKLLEFDLHGPGKIRVSKSGCLGRCSSGPCIVIYPEGVWYTYSS
FEDIEQIIRYHLIDGKIVAPLLLDR
>Mature_105_residues
MLSHYTKHVFICTNQKAPGKQCCANSGGEEFFDFMKSKLLEFDLHGPGKIRVSKSGCLGRCSSGPCIVIYPEGVWYTYSS
FEDIEQIIRYHLIDGKIVAPLLLDR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 11835; Mature: 11835

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHYTKHVFICTNQKAPGKQCCANSGGEEFFDFMKSKLLEFDLHGPGKIRVSKSGCLGR
CCCCCCEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHEEECCCCCCEEEEECCCCCCC
CSSGPCIVIYPEGVWYTYSSFEDIEQIIRYHLIDGKIVAPLLLDR
CCCCCEEEEEECCEEEEECCHHHHHHHHHHHCCCCCEECCEECCC
>Mature Secondary Structure
MLSHYTKHVFICTNQKAPGKQCCANSGGEEFFDFMKSKLLEFDLHGPGKIRVSKSGCLGR
CCCCCCEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHEEECCCCCCEEEEECCCCCCC
CSSGPCIVIYPEGVWYTYSSFEDIEQIIRYHLIDGKIVAPLLLDR
CCCCCEEEEEECCEEEEECCHHHHHHHHHHHCCCCCEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3790505; 7916603; 8334159; 8392833 [H]