Click here to switch to the map view.

The map label for this gene is petA [H]

Identifier: 54295546

GI number: 54295546

Start: 3004841

End: 3005458

Strand: Reverse

Name: petA [H]

Synonym: lpl2633

Alternate gene names: 54295546

Gene position: 3005458-3004841 (Counterclockwise)

Preceding gene: 54295547

Following gene: 54295545

Centisome position: 89.83

GC content: 44.01

Gene sequence:

>618_bases
ATGACTGATCTCAATCAGGATGTAAGTAATCATAATCAAGACGAACAATTGGATGAAGAGCGGCGTCGTTTTTTGTTGCA
TACTACCTGTGTCTTAGGCGGGGTAGGCGCTGCATGCGCCTTAACTCCCTTTATTACTTCCTGGTTACCAAGCTCTAAAG
CACAAGCAGCAGGTGCTCCAGTCAAAGTTGATGTCAGTAGAATGGAGCCTGGTGAACAGGCTATTATTGAATGGCGCGGC
AAACCAGTATGGATAATTAAACGAAGCAAGGACATGCTTAACCAGTTACAAAAAGAAGATGAGTCTCAACTGAGGGATCC
CGATTCTTTGGTGGATCAACAGCCGGAGTATGCGCAAAACAAGTTTCGCTCCATTAATCCCGAGTTTTTGGTTTTAATCG
GGATTTGTACTCATTTGGGTTGTTCCCCAAAATACAAACCTAGTCTTGGTGAGTTAGGCCCCGATTGGCCAGGTGGCTTT
TTTTGCCCATGTCATGGGTCAATGTTTGATCTTTCAGGCAGAGTATTTAAGGGCGTTCCTGCCCCTATCAATTTGGAAGT
ACCACCTTATCACTTTTTAGATGAACACACCATTGTGATAGGTGAGGATGCAAAATAA

Upstream 100 bases:

>100_bases
TTGAAAAATTGTTATTCTTTGTTATAACTAACGGGAGTTATATTAGGCGAACTGGCTCCAGTTCATAGACCATAATCAGG
ATGATTAAGCAGTGAGCGAA

Downstream 100 bases:

>100_bases
GGATTAAGGCATGAATGGGTTAGTCAATTGGTTAGATGAACGTTTCCCTCTTGTTAGCACTTGGAAAGCGCATTTCAGTA
ATTATTATGCGCCTAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAAGAPVKVDVSRMEPGEQAIIEWRG
KPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYAQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGF
FCPCHGSMFDLSGRVFKGVPAPINLEVPPYHFLDEHTIVIGEDAK

Sequences:

>Translated_205_residues
MTDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAAGAPVKVDVSRMEPGEQAIIEWRG
KPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYAQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGF
FCPCHGSMFDLSGRVFKGVPAPINLEVPPYHFLDEHTIVIGEDAK
>Mature_204_residues
TDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAAGAPVKVDVSRMEPGEQAIIEWRGK
PVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYAQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFF
CPCHGSMFDLSGRVFKGVPAPINLEVPPYHFLDEHTIVIGEDAK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=198, Percent_Identity=34.3434343434343, Blast_Score=118, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17540418, Length=207, Percent_Identity=34.2995169082126, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6320811, Length=193, Percent_Identity=36.7875647668394, Blast_Score=125, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24580896, Length=161, Percent_Identity=40.9937888198758, Blast_Score=115, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 22855; Mature: 22724

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAAGAP
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCC
VKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYAQN
EEEEHHHCCCCCHHHEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH
KFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFFCPCHGSMFDLSGRVFKGVP
HHHCCCCHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCEECCCC
APINLEVPPYHFLDEHTIVIGEDAK
CCEEECCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
TDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAAGAP
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCC
VKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYAQN
EEEEHHHCCCCCHHHEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH
KFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFFCPCHGSMFDLSGRVFKGVP
HHHCCCCHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCEECCCC
APINLEVPPYHFLDEHTIVIGEDAK
CCEEECCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA