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The map label for this gene is sbpA

Identifier: 54295525

GI number: 54295525

Start: 2980363

End: 2981079

Strand: Reverse

Name: sbpA

Synonym: lpl2612

Alternate gene names: NA

Gene position: 2981079-2980363 (Counterclockwise)

Preceding gene: 54295526

Following gene: 54295519

Centisome position: 89.1

GC content: 42.68

Gene sequence:

>717_bases
ATGTTAGTGACTAAGGAAGTGGAATACAAGGACGGTGATACTGTGTGCAAGGGTTTTACTGCCTATCATTCCAGTGTCTC
AAAACCGTTACCTTGCGTTATGGTTGCCCATGATTGGGGGGGACGTGGAGAGGGAGCTTGTAACAAAGCGATTCAGCTTG
CTGACATGGGGTATATTGGATTTGCTATAGACATGTATGGAAATGCCAAGCTAGGCAAGGATAAGATAGAGAAAAGAGCT
TTAATGACTCCTTTCAGAGAAAATAGAGGAAAGTTAATCACTCGTATTAATGCGGCCTTCAGCAAAGTGGTTCAGTTGCC
TGAGGTGGATAGTGATAAAGTGGCTGCTATTGGCTATTGTTTCGGTGGGTTGTGCGTATTGGATTTGATACGCTCCGGGG
CACCGCTTAGAGGGGTTGTCAGTTTTCATGGGGTATTATTACCTTTGGAGGGTGAGAGTAATAAGCCATTGACTGCGAAA
GTATTGATATTGCATGGTTATGATGACCCTTTAGTATCACTCGAGCAAGTTAATCAATTCTCTATTGAAATGACAGAAAG
GAAGGTGGACTGGCAAGTTCATGTTTATGGCCAAACAGCTCATTCATTTACTGACCCTAATGCGAATGATGATGAAATGG
GACTACATTACAATCAATTAGCGGATCAACGTTCCTGGCAAAGCACTCAATTGTTTTTGCAAGAGCTATTTGCATGA

Upstream 100 bases:

>100_bases
AAGGAGCCTTTCTTATTATTTATGGGCAGTTCATTTTATTAAGACTTTGACAGTTAGTTATTAATACTGTTTGGACGATC
TTTTAAAAACGAGGATTAAT

Downstream 100 bases:

>100_bases
TTTATTGATATCAGACCTTTGCATAACCTGACTTTTTCATTTTAGGGCAAGCTGCAAAGCCTTTGAGGGGGCAGAGATTA
ACTGCAATAAAATGAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolases; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Transposase Remnant

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLVTKEVEYKDGDTVCKGFTAYHSSVSKPLPCVMVAHDWGGRGEGACNKAIQLADMGYIGFAIDMYGNAKLGKDKIEKRA
LMTPFRENRGKLITRINAAFSKVVQLPEVDSDKVAAIGYCFGGLCVLDLIRSGAPLRGVVSFHGVLLPLEGESNKPLTAK
VLILHGYDDPLVSLEQVNQFSIEMTERKVDWQVHVYGQTAHSFTDPNANDDEMGLHYNQLADQRSWQSTQLFLQELFA

Sequences:

>Translated_238_residues
MLVTKEVEYKDGDTVCKGFTAYHSSVSKPLPCVMVAHDWGGRGEGACNKAIQLADMGYIGFAIDMYGNAKLGKDKIEKRA
LMTPFRENRGKLITRINAAFSKVVQLPEVDSDKVAAIGYCFGGLCVLDLIRSGAPLRGVVSFHGVLLPLEGESNKPLTAK
VLILHGYDDPLVSLEQVNQFSIEMTERKVDWQVHVYGQTAHSFTDPNANDDEMGLHYNQLADQRSWQSTQLFLQELFA
>Mature_238_residues
MLVTKEVEYKDGDTVCKGFTAYHSSVSKPLPCVMVAHDWGGRGEGACNKAIQLADMGYIGFAIDMYGNAKLGKDKIEKRA
LMTPFRENRGKLITRINAAFSKVVQLPEVDSDKVAAIGYCFGGLCVLDLIRSGAPLRGVVSFHGVLLPLEGESNKPLTAK
VLILHGYDDPLVSLEQVNQFSIEMTERKVDWQVHVYGQTAHSFTDPNANDDEMGLHYNQLADQRSWQSTQLFLQELFA

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17536419, Length=239, Percent_Identity=35.9832635983264, Blast_Score=144, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI17532655, Length=211, Percent_Identity=36.9668246445498, Blast_Score=142, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17532653, Length=245, Percent_Identity=34.6938775510204, Blast_Score=120, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17536415, Length=239, Percent_Identity=33.0543933054393, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI193204305, Length=212, Percent_Identity=33.0188679245283, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17534829, Length=155, Percent_Identity=40, Blast_Score=104, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26357; Mature: 26357

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTKEVEYKDGDTVCKGFTAYHSSVSKPLPCVMVAHDWGGRGEGACNKAIQLADMGYIG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHEEEECCCEEE
FAIDMYGNAKLGKDKIEKRALMTPFRENRGKLITRINAAFSKVVQLPEVDSDKVAAIGYC
EEEEECCCCCCCHHHHHHHHHCCCCHHCCCCEEEHHHHHHHHHHCCCCCCCCCEEEHHHH
FGGLCVLDLIRSGAPLRGVVSFHGVLLPLEGESNKPLTAKVLILHGYDDPLVSLEQVNQF
HHHHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHCCCE
SIEMTERKVDWQVHVYGQTAHSFTDPNANDDEMGLHYNQLADQRSWQSTQLFLQELFA
EEEEECEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLVTKEVEYKDGDTVCKGFTAYHSSVSKPLPCVMVAHDWGGRGEGACNKAIQLADMGYIG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHEEEECCCEEE
FAIDMYGNAKLGKDKIEKRALMTPFRENRGKLITRINAAFSKVVQLPEVDSDKVAAIGYC
EEEEECCCCCCCHHHHHHHHHCCCCHHCCCCEEEHHHHHHHHHHCCCCCCCCCEEEHHHH
FGGLCVLDLIRSGAPLRGVVSFHGVLLPLEGESNKPLTAKVLILHGYDDPLVSLEQVNQF
HHHHHHHHHHHCCCCEEEEEEECEEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHCCCE
SIEMTERKVDWQVHVYGQTAHSFTDPNANDDEMGLHYNQLADQRSWQSTQLFLQELFA
EEEEECEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA