Click here to switch to the map view.

The map label for this gene is 54295496

Identifier: 54295496

GI number: 54295496

Start: 2950804

End: 2951019

Strand: Reverse

Name: 54295496

Synonym: lpl2583

Alternate gene names: NA

Gene position: 2951019-2950804 (Counterclockwise)

Preceding gene: 54295497

Following gene: 54295493

Centisome position: 88.2

GC content: 44.91

Gene sequence:

>216_bases
ATGCTGCTGCAAATACGTGATTTTATCTACCGGGAAGGGGTAGTAAGCACTCAACAGTTGAGTAGGGAGTTTCACTTGGA
TCTGACTGCATTGCAACCTATGCTGGACTTATGGGTTAGAAAGGGAGCAATAAGGAAGTGTCAGGGAGGAGCGAATTGCA
AAACTGCCTGCTTTAAATGCCGCACTCCACCAGATTATTATCAATCGGTTGTGTAA

Upstream 100 bases:

>100_bases
CATCCTCAACAAAGTATGATCTGGATTTTGGCTATGTCACTGAGTCTGCTTTTTGTTTTAGCTGTATTTCGTTATAGCCA
GTATGGTATGGGGAGGCAAA

Downstream 100 bases:

>100_bases
TTATTAGAATTGATGCAATTATCAGGTTAATAATTTCTTTCCAAGGCAAATTTGGCCAAATCGACTAAAGCTTCTTTATA
AACCGAGTCAGGCAGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MLLQIRDFIYREGVVSTQQLSREFHLDLTALQPMLDLWVRKGAIRKCQGGANCKTACFKCRTPPDYYQSVV

Sequences:

>Translated_71_residues
MLLQIRDFIYREGVVSTQQLSREFHLDLTALQPMLDLWVRKGAIRKCQGGANCKTACFKCRTPPDYYQSVV
>Mature_71_residues
MLLQIRDFIYREGVVSTQQLSREFHLDLTALQPMLDLWVRKGAIRKCQGGANCKTACFKCRTPPDYYQSVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8209; Mature: 8209

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQIRDFIYREGVVSTQQLSREFHLDLTALQPMLDLWVRKGAIRKCQGGANCKTACFKC
CCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEEEC
RTPPDYYQSVV
CCCHHHHHCCC
>Mature Secondary Structure
MLLQIRDFIYREGVVSTQQLSREFHLDLTALQPMLDLWVRKGAIRKCQGGANCKTACFKC
CCCHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCEEEC
RTPPDYYQSVV
CCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA