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The map label for this gene is 54295476

Identifier: 54295476

GI number: 54295476

Start: 2925427

End: 2926638

Strand: Reverse

Name: 54295476

Synonym: lpl2562

Alternate gene names: NA

Gene position: 2926638-2925427 (Counterclockwise)

Preceding gene: 54295477

Following gene: 54295474

Centisome position: 87.47

GC content: 38.78

Gene sequence:

>1212_bases
ATGTTTTTAACCATAAATGATTTACAAAGCCAAATTCAATTGGCTAAAAAGAGACTGTATGTTTTAGCCAAAAACTGGCT
GGATACTCAAAAGGAAGCAATCAATTCAAAAGATAAGGCAAATTGGCTCAATGCATTTCAAGCCTCGACAAAAGAAGCAA
TGCAGGAGCAATTAAAAGCCACAGGTTTTCCTCTAATCCGCAATGCAATATTGGTCAATCAATCGGAGGATGAACTTCAG
CAGCATCGTCTGGAGCAATCCTTGTCTTTGATCCACTCAGAAAATTTCCCCGAGCAATTCAACTCAAGAACAGTGCCCAG
AGTTATTTATGTATGCCACTCAGGAGAAAATAATCAAGTAATCAAGAGATTATGCCAACTTACTACCTTAATGGAACAAT
TGCATACATTGGAGGAGTTAACCTTTGAAGTCCAAACTAATGTTCATTTTAGAGGCTTAAATTTGGCTTATCGCATGGCA
CGCAGTATCAATAAGGAGTGGCGCGATGTCGAAAAGGGTCGTGAAACTGTAGAGTATTATGCGGAGCGTCTGCAGATAGC
AGAAAAACAATATAAATTGGCATCGGATTTTTGTCATGAGTGTTTAGGGATTTATAAGGAGCAATTGGATGCTCGGATAA
TGTACTTTAATGAATCATTAAATTTCTTTGTTGAGTGCCTGGCCGCCACTTTTTCCTCTGTAAAAGACGACAGGTATTGG
CTAACAAAATTTTTACTACCCTCTTTACCTTGGCATAGCATGCTTAATGAGGTAGCTACATGCCTCTTTACTACAAATGG
CTTTACCAACCCGACAATCGACAGCATTGAAGTGAATCGCTCACATTTAAAAGCAATTACAGAACAATTTGCCAAATTGA
TGATGGCGCCTTTTTGTTCTTTGGAAAAAGAGTTACAGGGCAAAATAGAAAAAGTAGAGAATGAGCAAAAAATAGCCGGA
GAAAATGTGTATGCCATGTCCTCGGAATTGGATATAGTGATACACATGCAGTCACAAAGAAAATTAGCCGCATTGCTGTT
CCCTGCTCAACCATTAAGTATGTTAGGCTTTTTCCAGGGGGTTGCAGCAGCAATGGGTAGAGATTATTTTTATTCAACTT
TTATTAAAGGGAATCAAAGCCAAGAACCCAGGATAACAGATGATGAAAAATCTCTCATCGAGGCAAGCAATTATTCTAAC
GGGCTACACTAG

Upstream 100 bases:

>100_bases
TGTATTAAAATATCCGGTTATGAATGAATTTTTTTGATTGAAGTATGCATTTTAGAGTGATAAATTAAGGACACTCAAGC
AAGCAAGTGAGCATAAAAGG

Downstream 100 bases:

>100_bases
AGAACCGAACCGGGAATTACGGTTCGGTAGTTTCGAACTTAGAGCGACGGAAACTCTCGATTAGGCAGCCATAGCTTTAA
GACGTGCAACCAGACGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MFLTINDLQSQIQLAKKRLYVLAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKATGFPLIRNAILVNQSEDELQ
QHRLEQSLSLIHSENFPEQFNSRTVPRVIYVCHSGENNQVIKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMA
RSINKEWRDVEKGRETVEYYAERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLAATFSSVKDDRYW
LTKFLLPSLPWHSMLNEVATCLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCSLEKELQGKIEKVENEQKIAG
ENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQGVAAAMGRDYFYSTFIKGNQSQEPRITDDEKSLIEASNYSN
GLH

Sequences:

>Translated_403_residues
MFLTINDLQSQIQLAKKRLYVLAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKATGFPLIRNAILVNQSEDELQ
QHRLEQSLSLIHSENFPEQFNSRTVPRVIYVCHSGENNQVIKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMA
RSINKEWRDVEKGRETVEYYAERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLAATFSSVKDDRYW
LTKFLLPSLPWHSMLNEVATCLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCSLEKELQGKIEKVENEQKIAG
ENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQGVAAAMGRDYFYSTFIKGNQSQEPRITDDEKSLIEASNYSN
GLH
>Mature_403_residues
MFLTINDLQSQIQLAKKRLYVLAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKATGFPLIRNAILVNQSEDELQ
QHRLEQSLSLIHSENFPEQFNSRTVPRVIYVCHSGENNQVIKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMA
RSINKEWRDVEKGRETVEYYAERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLAATFSSVKDDRYW
LTKFLLPSLPWHSMLNEVATCLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCSLEKELQGKIEKVENEQKIAG
ENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQGVAAAMGRDYFYSTFIKGNQSQEPRITDDEKSLIEASNYSN
GLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46578; Mature: 46578

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLTINDLQSQIQLAKKRLYVLAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKA
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TGFPLIRNAILVNQSEDELQQHRLEQSLSLIHSENFPEQFNSRTVPRVIYVCHSGENNQV
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEEECCCCHHH
IKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMARSINKEWRDVEKGRETVEYY
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLAATFSSVKDDRYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCHHHH
LTKFLLPSLPWHSMLNEVATCLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCS
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
LEKELQGKIEKVENEQKIAGENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQG
HHHHHHHHHHHHCCHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHH
VAAAMGRDYFYSTFIKGNQSQEPRITDDEKSLIEASNYSNGLH
HHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFLTINDLQSQIQLAKKRLYVLAKNWLDTQKEAINSKDKANWLNAFQASTKEAMQEQLKA
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TGFPLIRNAILVNQSEDELQQHRLEQSLSLIHSENFPEQFNSRTVPRVIYVCHSGENNQV
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEEECCCCHHH
IKRLCQLTTLMEQLHTLEELTFEVQTNVHFRGLNLAYRMARSINKEWRDVEKGRETVEYY
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERLQIAEKQYKLASDFCHECLGIYKEQLDARIMYFNESLNFFVECLAATFSSVKDDRYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCHHHH
LTKFLLPSLPWHSMLNEVATCLFTTNGFTNPTIDSIEVNRSHLKAITEQFAKLMMAPFCS
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
LEKELQGKIEKVENEQKIAGENVYAMSSELDIVIHMQSQRKLAALLFPAQPLSMLGFFQG
HHHHHHHHHHHHCCHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHH
VAAAMGRDYFYSTFIKGNQSQEPRITDDEKSLIEASNYSNGLH
HHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA