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The map label for this gene is 54295460

Identifier: 54295460

GI number: 54295460

Start: 2906910

End: 2908442

Strand: Reverse

Name: 54295460

Synonym: lpl2546

Alternate gene names: NA

Gene position: 2908442-2906910 (Counterclockwise)

Preceding gene: 54295461

Following gene: 54295459

Centisome position: 86.93

GC content: 42.86

Gene sequence:

>1533_bases
ATGTCATATCCTCTAAAAAAAGTATTTTTGATGTGGTCTTTTTCTATAATACCATATATTGCTTCTGCTTCATTCTCTGG
TTTGATAGGCGTGGATTATGAGCCAAATCATTACGCGGGGAATGTCCCGTTAAATAATCATGATGTCTTTGTTGTAGGTA
ATAATCAGGCAGGCATACCAATTAGCAATGTTTATGCTGAGCTGGTTCAGTTAAAAGAAGCGGGATTTAATACAGTTCGC
TCCTATCAGACAACAGATTATTCATGGATAGAAATAATTAATCAGGCTCATGCTTTGGGAATGAAAGTAATTTATGAGGC
AGTGATTCCTCAACAACCAGCGGATTCACCATACAGTGGTGGATGCCCAGTCTCTCCTGCTAATCAAAACTATATCCCCT
GCGCGCAAGCACTGCTCAATTCTATAATCACGCAAGTGACTGCGCAAGTATTTAATGAAACCGTAATTCTCGTATTCGCG
GGACACGAAAACTATTGTGAGGCAGGCAATACAACGGCACCTTGTAACAATCCTGTTACATCAAATGTAGCTTACTTGAC
TTCAGCCATTATTGCTTTGCAAAGTACGTTGGCTGCTGCAGATCTCTTTACACCTGTAGGCTCTGCTTTAGTGAGTGGTA
ATTTGGTTACCCCAAGCCCAGCCATTTCTGCAGACATGGTTACTTTAATCAATAGCTATTCTCCTGATGCTCCTTTAGCT
TTTGATCCTTATCCATTTCAATGGGGAGTCGCCGCCAACGTGGCAGTATGGACAACTCCTTTGGCACCACCCACAGTGCA
AGCAACAAACTCATTAGCCTGGGATTATATTAATGTGGTCGGCTCCGCAGATCCTGCTGCTTTACCTACAGCTCCAACAC
AACTATTTTATACCGCCGGCAGGGTTCTTTTGGCGGCAGAAACCGGTTGGGCAACTGCAGGGGCCACCACAGGATATGCT
TGTAATTCCCCTGGGCCATGTGTTCCATCTGTTGCCAATGCCTCTACGTATTTCAAAGCTCTATATCAATCCAATGCGGC
CAATTTTGTTGCTAACTCGGGATATTCAATTGGGGTTCTGGCATTTGAAGCTTATGATGAGCCAAACAAAGGAACTACCC
ATGCTGAGGGGCATTATGGGCTATTTGATTCCAACTGCGTGCAAAAAGCAGCTGGACTGGTTCCTAAAAACCGAATGGTC
TCAGCTCTGGGATGTCAGGGTTTTTCAAAGGGCTCTTTATTAACCATAGTAGGATTTGGTCATCCTTATACATTGGTAAT
CAAACAAAAAAATCCAGCTACTGGTAAAGAGATCTCTATAACGACGAAGAACACAGGTAAAGCAGGGCCTTTAGCAGATG
CACCATGGCCTCAATATTTGGTTTTTCCCGGAGCAACAATTACTATTAGAGGTAATCCTTCTTGTACAAAAGCAGTGAGT
TCAATTGACAGTGCCGGTCATATTACTTTTAGTCCGCCAAATCCATCGGGATGTAATTGTCCGAATGATGGCAATAGTAA
CTGTTTTTATTAG

Upstream 100 bases:

>100_bases
CAAAAAGTAAATTTTTTGACTTAAAACTTCATGAAGAGACGTTGAAAAATTTAGAAGCCTCTTTCGTATAAATATTTATA
AAACAATTCAGGCAAATGAT

Downstream 100 bases:

>100_bases
ATTCTCGGCAATGAAACATCTATGAATTTCACTGCCGCTTCATTATATGAAATATGAACTTTCACGGAGACTAAGATGAA
ACACATGGTATTGTTTCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MSYPLKKVFLMWSFSIIPYIASASFSGLIGVDYEPNHYAGNVPLNNHDVFVVGNNQAGIPISNVYAELVQLKEAGFNTVR
SYQTTDYSWIEIINQAHALGMKVIYEAVIPQQPADSPYSGGCPVSPANQNYIPCAQALLNSIITQVTAQVFNETVILVFA
GHENYCEAGNTTAPCNNPVTSNVAYLTSAIIALQSTLAAADLFTPVGSALVSGNLVTPSPAISADMVTLINSYSPDAPLA
FDPYPFQWGVAANVAVWTTPLAPPTVQATNSLAWDYINVVGSADPAALPTAPTQLFYTAGRVLLAAETGWATAGATTGYA
CNSPGPCVPSVANASTYFKALYQSNAANFVANSGYSIGVLAFEAYDEPNKGTTHAEGHYGLFDSNCVQKAAGLVPKNRMV
SALGCQGFSKGSLLTIVGFGHPYTLVIKQKNPATGKEISITTKNTGKAGPLADAPWPQYLVFPGATITIRGNPSCTKAVS
SIDSAGHITFSPPNPSGCNCPNDGNSNCFY

Sequences:

>Translated_510_residues
MSYPLKKVFLMWSFSIIPYIASASFSGLIGVDYEPNHYAGNVPLNNHDVFVVGNNQAGIPISNVYAELVQLKEAGFNTVR
SYQTTDYSWIEIINQAHALGMKVIYEAVIPQQPADSPYSGGCPVSPANQNYIPCAQALLNSIITQVTAQVFNETVILVFA
GHENYCEAGNTTAPCNNPVTSNVAYLTSAIIALQSTLAAADLFTPVGSALVSGNLVTPSPAISADMVTLINSYSPDAPLA
FDPYPFQWGVAANVAVWTTPLAPPTVQATNSLAWDYINVVGSADPAALPTAPTQLFYTAGRVLLAAETGWATAGATTGYA
CNSPGPCVPSVANASTYFKALYQSNAANFVANSGYSIGVLAFEAYDEPNKGTTHAEGHYGLFDSNCVQKAAGLVPKNRMV
SALGCQGFSKGSLLTIVGFGHPYTLVIKQKNPATGKEISITTKNTGKAGPLADAPWPQYLVFPGATITIRGNPSCTKAVS
SIDSAGHITFSPPNPSGCNCPNDGNSNCFY
>Mature_509_residues
SYPLKKVFLMWSFSIIPYIASASFSGLIGVDYEPNHYAGNVPLNNHDVFVVGNNQAGIPISNVYAELVQLKEAGFNTVRS
YQTTDYSWIEIINQAHALGMKVIYEAVIPQQPADSPYSGGCPVSPANQNYIPCAQALLNSIITQVTAQVFNETVILVFAG
HENYCEAGNTTAPCNNPVTSNVAYLTSAIIALQSTLAAADLFTPVGSALVSGNLVTPSPAISADMVTLINSYSPDAPLAF
DPYPFQWGVAANVAVWTTPLAPPTVQATNSLAWDYINVVGSADPAALPTAPTQLFYTAGRVLLAAETGWATAGATTGYAC
NSPGPCVPSVANASTYFKALYQSNAANFVANSGYSIGVLAFEAYDEPNKGTTHAEGHYGLFDSNCVQKAAGLVPKNRMVS
ALGCQGFSKGSLLTIVGFGHPYTLVIKQKNPATGKEISITTKNTGKAGPLADAPWPQYLVFPGATITIRGNPSCTKAVSS
IDSAGHITFSPPNPSGCNCPNDGNSNCFY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53619; Mature: 53487

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPLKKVFLMWSFSIIPYIASASFSGLIGVDYEPNHYAGNVPLNNHDVFVVGNNQAGIP
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCCCCCCEEEEECCCCCCC
ISNVYAELVQLKEAGFNTVRSYQTTDYSWIEIINQAHALGMKVIYEAVIPQQPADSPYSG
HHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GCPVSPANQNYIPCAQALLNSIITQVTAQVFNETVILVFAGHENYCEAGNTTAPCNNPVT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHCCCCCCCCCCCCCC
SNVAYLTSAIIALQSTLAAADLFTPVGSALVSGNLVTPSPAISADMVTLINSYSPDAPLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEE
FDPYPFQWGVAANVAVWTTPLAPPTVQATNSLAWDYINVVGSADPAALPTAPTQLFYTAG
ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHEECC
RVLLAAETGWATAGATTGYACNSPGPCVPSVANASTYFKALYQSNAANFVANSGYSIGVL
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEEE
AFEAYDEPNKGTTHAEGHYGLFDSNCVQKAAGLVPKNRMVSALGCQGFSKGSLLTIVGFG
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEECC
HPYTLVIKQKNPATGKEISITTKNTGKAGPLADAPWPQYLVFPGATITIRGNPSCTKAVS
CCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEECCCHHHHHHH
SIDSAGHITFSPPNPSGCNCPNDGNSNCFY
HCCCCCEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYPLKKVFLMWSFSIIPYIASASFSGLIGVDYEPNHYAGNVPLNNHDVFVVGNNQAGIP
CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECCCCCCCCCEEEEECCCCCCC
ISNVYAELVQLKEAGFNTVRSYQTTDYSWIEIINQAHALGMKVIYEAVIPQQPADSPYSG
HHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GCPVSPANQNYIPCAQALLNSIITQVTAQVFNETVILVFAGHENYCEAGNTTAPCNNPVT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHCCCCCCCCCCCCCC
SNVAYLTSAIIALQSTLAAADLFTPVGSALVSGNLVTPSPAISADMVTLINSYSPDAPLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEE
FDPYPFQWGVAANVAVWTTPLAPPTVQATNSLAWDYINVVGSADPAALPTAPTQLFYTAG
ECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHEECC
RVLLAAETGWATAGATTGYACNSPGPCVPSVANASTYFKALYQSNAANFVANSGYSIGVL
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCCEEEEE
AFEAYDEPNKGTTHAEGHYGLFDSNCVQKAAGLVPKNRMVSALGCQGFSKGSLLTIVGFG
EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEECC
HPYTLVIKQKNPATGKEISITTKNTGKAGPLADAPWPQYLVFPGATITIRGNPSCTKAVS
CCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEECCCHHHHHHH
SIDSAGHITFSPPNPSGCNCPNDGNSNCFY
HCCCCCEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA