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The map label for this gene is 54295294

Identifier: 54295294

GI number: 54295294

Start: 2708886

End: 2709269

Strand: Reverse

Name: 54295294

Synonym: lpl2379

Alternate gene names: NA

Gene position: 2709269-2708886 (Counterclockwise)

Preceding gene: 54295299

Following gene: 54295293

Centisome position: 80.98

GC content: 36.98

Gene sequence:

>384_bases
ATGTATATACAAAAATTAAAAGAAATGTTTGCTCAAATGGTCATCAAGAAAAACGCCAGTCTTATTCCAGAATATTACCA
TGGGGAGTTTCTGCTCTATACCAATGATATAGTGACAGGCTATGATGAATTTCTAAGCTCGCATCAACAGTATTATGCGA
CTGAAATTCAATATCAAGTTGAATGCGATGAAGAGACCTTCCTTGAGCAAGGTGAAAAAATAGCTGGGCGGGTATTTATT
ACCACCACTCGACCTAATGAGCCAGCCAAGAGAATCGAAGTCATTTTGATTGCCCAATATAAAGATGAAAAGATTTATCG
ATTATGGGAGTTAACTTATCCAGATTGGTCCAAGTTACCTGCTTTTTCAAATCAGCTAACCTAG

Upstream 100 bases:

>100_bases
TTCAATTAATGAACAATACTGAGGGTAATTTTTCAAAATGATCAGTTTTATTGCTAAATAATTGTTGTATAATTTTGAAA
AATTAATTTGAGAGTAGAAA

Downstream 100 bases:

>100_bases
ACGATTCTTTTCTCCTCCAAACAGGGGAATATCAGAAAAGTAGTTGGTCAAGATTTCTCCGCTTTACATGGTGTAGCGCC
ACGCAGGAGCGAGCAATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MYIQKLKEMFAQMVIKKNASLIPEYYHGEFLLYTNDIVTGYDEFLSSHQQYYATEIQYQVECDEETFLEQGEKIAGRVFI
TTTRPNEPAKRIEVILIAQYKDEKIYRLWELTYPDWSKLPAFSNQLT

Sequences:

>Translated_127_residues
MYIQKLKEMFAQMVIKKNASLIPEYYHGEFLLYTNDIVTGYDEFLSSHQQYYATEIQYQVECDEETFLEQGEKIAGRVFI
TTTRPNEPAKRIEVILIAQYKDEKIYRLWELTYPDWSKLPAFSNQLT
>Mature_127_residues
MYIQKLKEMFAQMVIKKNASLIPEYYHGEFLLYTNDIVTGYDEFLSSHQQYYATEIQYQVECDEETFLEQGEKIAGRVFI
TTTRPNEPAKRIEVILIAQYKDEKIYRLWELTYPDWSKLPAFSNQLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15152; Mature: 15152

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIQKLKEMFAQMVIKKNASLIPEYYHGEFLLYTNDIVTGYDEFLSSHQQYYATEIQYQV
CCHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHEEEEEEEEEE
ECDEETFLEQGEKIAGRVFITTTRPNEPAKRIEVILIAQYKDEKIYRLWELTYPDWSKLP
ECCHHHHHHCCCCEECEEEEEECCCCCCHHHEEEEEEEECCCCCEEEEEEECCCCHHCCC
AFSNQLT
CCCCCCC
>Mature Secondary Structure
MYIQKLKEMFAQMVIKKNASLIPEYYHGEFLLYTNDIVTGYDEFLSSHQQYYATEIQYQV
CCHHHHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCCCCCHHHHHHHHHHEEEEEEEEEE
ECDEETFLEQGEKIAGRVFITTTRPNEPAKRIEVILIAQYKDEKIYRLWELTYPDWSKLP
ECCHHHHHHCCCCEECEEEEEECCCCCCHHHEEEEEEEECCCCCEEEEEEECCCCHHCCC
AFSNQLT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA