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The map label for this gene is sdbC

Identifier: 54295232

GI number: 54295232

Start: 2638570

End: 2639874

Strand: Reverse

Name: sdbC

Synonym: lpl2315

Alternate gene names: NA

Gene position: 2639874-2638570 (Counterclockwise)

Preceding gene: 54295234

Following gene: 54295231

Centisome position: 78.9

GC content: 40.31

Gene sequence:

>1305_bases
ATGCCGAATTCAAGTATACAAATCTGGTTGCAAAGACAAATAGCTTTAAGAACTTTTCCTCCGAATAGAGAGGACTGGTA
TGTCAAAAATGGTTTCGGTAATTCAGAGATGTCACTTGAAGAACGTTTTGCCTGTTTTGTAGAGGCAATACGTCAAGAGG
ATTCTCCCTACCATGAACAATTATCAGGTATAGACTTTCATCGCTTTGAAATCGAGGTGACTTTAGCCAACCAAAAAACC
TGTATGACCGAGGTGATAGGGTTTCAGAATAATTCCAATCAATCAAGATCCTTACTAAATGAGAAGGTCAAAGCTGTTGG
AAAGGGAAAACATGTGATTTATTTCACTGGAATAGGAACACAATATCAAGATTGCCTGATTGATATAGCAAAAGCTGTTC
AAATAACGGGAGCGCATTATTACGCTTTTGAATACCCGGGCATGAGAAAATTGGGTGGTGAAGTGTTAGAAGTCAATGAT
ATGGTTAACACTGGAATAGTGCTGGCCAATACCTTACTTGAAAAAGGCATATCAATTGATGATATCCTTTTTCAAGGCGA
CTCCTTTGGTGCTGCGGTGGCAAAAAAAGTCAGTGATCAATTCAAACTGCAATCAAATGTAACAGTAAGATGCATTCTGA
ATAATACCTTTTCCACTTTTCAAGCTGCCGTCGAAGGAAATCTGGGTGCATTCTCTACTTTGCGTTATACAGTTCGCCCT
CTGCTTCGCTATACTGGTTGGGATATTCGCCCTGGGGATAACTATGGCCTGGATACCCCTTACCAAATTCATATCAATCA
TACAGGTGATCTTACCTTAGGGGCAGGGCATGCAACGCTTGCAGAAAGCGTTGAATCCAATTCTCAACTTGAACATTTCG
TTGATCCCTGTCCTGAAGAGTATCGTATTAAAAGAGATATCTATAAACAGTGGCATTGGGCCTCATTAAGCGAACAAGGA
ATAAGATTTCTCGAGACGAAATATGGCAGAAACAGTGACGGTCAATTGGACACGCATCTGGCCGATTTGTATTTGCTAAA
GTATGATACAGGTCTGGGGGTTTATGAATCATTTATTTGTAAATATCTCGAAGACAGTAATGACTATATCGCCAATCACC
CGCAAAAACTCTCGCTTGAGGAATTACCAATCCCTCTGGAGTCCGAAACAGTTTCATTGGGACAATTGATTGTCTCTGTG
TTACCATCAAGGCCTAGTATAGCCGGTTTTTTTGGTCGTCCTAAACCAGTCAAGGATGAAGTGGATTCAGAGAATCAAGC
TCAGAAATCAATAGAGTTAAAGTAA

Upstream 100 bases:

>100_bases
GTGCTGAAAATAAGAATTATCTCTAATAAAGACGCGCAAAGAAATGTTGACTCATTAGCAAATTGTATGCACACTTATTG
ATCAAAAAAAGGGGAGTGCT

Downstream 100 bases:

>100_bases
GCTGTATTACTACCTGTGAAACAAAAGCAACAGCTTGAACATGGATAAAAAAATTATTGCGGCAGCCTCTTTTGGCACCT
TGTTTGAAATGTACGACTAT

Product: SdbC proteins, putative substrate of the Dot/Icm system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MPNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFACFVEAIRQEDSPYHEQLSGIDFHRFEIEVTLANQKT
CMTEVIGFQNNSNQSRSLLNEKVKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVND
MVNTGIVLANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
LLRYTGWDIRPGDNYGLDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQG
IRFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIANHPQKLSLEELPIPLESETVSLGQLIVSV
LPSRPSIAGFFGRPKPVKDEVDSENQAQKSIELK

Sequences:

>Translated_434_residues
MPNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFACFVEAIRQEDSPYHEQLSGIDFHRFEIEVTLANQKT
CMTEVIGFQNNSNQSRSLLNEKVKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVND
MVNTGIVLANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
LLRYTGWDIRPGDNYGLDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQG
IRFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIANHPQKLSLEELPIPLESETVSLGQLIVSV
LPSRPSIAGFFGRPKPVKDEVDSENQAQKSIELK
>Mature_433_residues
PNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFACFVEAIRQEDSPYHEQLSGIDFHRFEIEVTLANQKTC
MTEVIGFQNNSNQSRSLLNEKVKAVGKGKHVIYFTGIGTQYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDM
VNTGIVLANTLLEKGISIDDILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRPL
LRYTGWDIRPGDNYGLDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEEYRIKRDIYKQWHWASLSEQGI
RFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFICKYLEDSNDYIANHPQKLSLEELPIPLESETVSLGQLIVSVL
PSRPSIAGFFGRPKPVKDEVDSENQAQKSIELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48977; Mature: 48846

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFACFVEAIRQEDSPYHEQ
CCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
LSGIDFHRFEIEVTLANQKTCMTEVIGFQNNSNQSRSLLNEKVKAVGKGKHVIYFTGIGT
HCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC
QYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDMVNTGIVLANTLLEKGISID
HHHHHHHHHHHHHEECCCEEEEEECCCHHHHCCCEEEECHHHHCCHHHHHHHHHCCCCHH
DILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
HEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
LLRYTGWDIRPGDNYGLDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEE
HHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCHHHHHHCCCCHH
YRIKRDIYKQWHWASLSEQGIRFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFIC
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEEECCCCHHHHHHHH
KYLEDSNDYIANHPQKLSLEELPIPLESETVSLGQLIVSVLPSRPSIAGFFGRPKPVKDE
HHHHCCCCHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC
VDSENQAQKSIELK
CCCCHHHHHCCCCC
>Mature Secondary Structure 
PNSSIQIWLQRQIALRTFPPNREDWYVKNGFGNSEMSLEERFACFVEAIRQEDSPYHEQ
CCCCEEEEEEEEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
LSGIDFHRFEIEVTLANQKTCMTEVIGFQNNSNQSRSLLNEKVKAVGKGKHVIYFTGIGT
HCCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCC
QYQDCLIDIAKAVQITGAHYYAFEYPGMRKLGGEVLEVNDMVNTGIVLANTLLEKGISID
HHHHHHHHHHHHHEECCCEEEEEECCCHHHHCCCEEEECHHHHCCHHHHHHHHHCCCCHH
DILFQGDSFGAAVAKKVSDQFKLQSNVTVRCILNNTFSTFQAAVEGNLGAFSTLRYTVRP
HEEECCCCHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHH
LLRYTGWDIRPGDNYGLDTPYQIHINHTGDLTLGAGHATLAESVESNSQLEHFVDPCPEE
HHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHCCCHHHHHHCCCCHH
YRIKRDIYKQWHWASLSEQGIRFLETKYGRNSDGQLDTHLADLYLLKYDTGLGVYESFIC
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHEEEEEEEECCCCHHHHHHHH
KYLEDSNDYIANHPQKLSLEELPIPLESETVSLGQLIVSVLPSRPSIAGFFGRPKPVKDE
HHHHCCCCHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC
VDSENQAQKSIELK
CCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA