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The map label for this gene is ocd2 [H]

Identifier: 54295040

GI number: 54295040

Start: 2422025

End: 2422996

Strand: Reverse

Name: ocd2 [H]

Synonym: lpl2120

Alternate gene names: 54295040

Gene position: 2422996-2422025 (Counterclockwise)

Preceding gene: 54295041

Following gene: 54295039

Centisome position: 72.42

GC content: 39.71

Gene sequence:

>972_bases
ATGAGTCTCAGGATATTGTCTTTAAGCGATGTAAAGCATAGCATCACCATGCATCAGGCAATCAGTGCTTTGGAAAGCGC
ATTTATTCAATTGGCAAATAACACGGTGAAGTTGCCCTTGAGAACGGGTGTTACCATTGAAGAAGAAAACGGATTAATGT
TGACTATGCCGGGTTATCTTGCCCAAGAAAAAAGCTTGGGCTTGAAAGTAGTATCCATTTTTCCTGAAAATTTGACTAAA
AATAAACCTACTATCACTGGTTTTATTATGTTGCTTGACGCAACAACAGGTGAAGCTAAAGTATTAATGGATGCTGCTTA
CCTCACCTCCTTAAGAACAGGTGCTGTTTCAGGACTGGCGACAAAATATTTTGCGCGCGATAATGCGACTCAGGTCGCGA
TCATTGGGTCAGGTGCTCAAGCGAAAACACAACTTGAGGCAGTTGCTTCTGTGCGAGATATACAACAGGTTTTTGTTTGG
TCGCGCAATATTAAAAATGCCGAAAAATTCGCTAACGAATTCGAAGATCAATTTGATATGACAATTTGTTCTTCTGTCGC
CATGGCAGTGAAAGATGCCGATATTATTTGTACAGCAACCAATAGCACAGAACCACTGATTCATTTTGGAGACATTTCGC
CGCATGCCCATATTAATGCCATAGGCTCTCATCACCCTTCAATGAAAGAAATTAGCCATGATGTGTTAAGCCGAGCAGTG
GTGATTGCTGATCAGTTAGACGCTGTTTTAGCTGAATCAGGCGAAATCATTAGTGCAGTAGAGCACAATCATTTAAAAAA
GGAATCCATTATTGAAATCGGCCAATGGTTATTACAAAAGAATACTGACTGCAAAGATAAGCTCACAGTATTTAAATCCG
TTGGTTTGGCAATACAGGATTTAAGTGTTGCCAACGCTGTTTATCAAAATGCATTGAAGAAAAATCTGGGTGAGTTATTT
TCTATAAGTTAG

Upstream 100 bases:

>100_bases
CTTTGATATGAAAACAGGAAATATTTTATTTGATTTAAAACCATAAGATGTGATTCTATTCAGTCACTACGTAGTTAACT
AAAGTATAGGGTTTATTGAT

Downstream 100 bases:

>100_bases
TAAGGGTAAAACCGATTAGAGTGAGTGTAAATGAATCATTCTGCAAAAAATAAAACGCTTATTTCGGTTTTATATTGCTT
ACGTCATCTGATAGCTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSLRILSLSDVKHSITMHQAISALESAFIQLANNTVKLPLRTGVTIEEENGLMLTMPGYLAQEKSLGLKVVSIFPENLTK
NKPTITGFIMLLDATTGEAKVLMDAAYLTSLRTGAVSGLATKYFARDNATQVAIIGSGAQAKTQLEAVASVRDIQQVFVW
SRNIKNAEKFANEFEDQFDMTICSSVAMAVKDADIICTATNSTEPLIHFGDISPHAHINAIGSHHPSMKEISHDVLSRAV
VIADQLDAVLAESGEIISAVEHNHLKKESIIEIGQWLLQKNTDCKDKLTVFKSVGLAIQDLSVANAVYQNALKKNLGELF
SIS

Sequences:

>Translated_323_residues
MSLRILSLSDVKHSITMHQAISALESAFIQLANNTVKLPLRTGVTIEEENGLMLTMPGYLAQEKSLGLKVVSIFPENLTK
NKPTITGFIMLLDATTGEAKVLMDAAYLTSLRTGAVSGLATKYFARDNATQVAIIGSGAQAKTQLEAVASVRDIQQVFVW
SRNIKNAEKFANEFEDQFDMTICSSVAMAVKDADIICTATNSTEPLIHFGDISPHAHINAIGSHHPSMKEISHDVLSRAV
VIADQLDAVLAESGEIISAVEHNHLKKESIIEIGQWLLQKNTDCKDKLTVFKSVGLAIQDLSVANAVYQNALKKNLGELF
SIS
>Mature_322_residues
SLRILSLSDVKHSITMHQAISALESAFIQLANNTVKLPLRTGVTIEEENGLMLTMPGYLAQEKSLGLKVVSIFPENLTKN
KPTITGFIMLLDATTGEAKVLMDAAYLTSLRTGAVSGLATKYFARDNATQVAIIGSGAQAKTQLEAVASVRDIQQVFVWS
RNIKNAEKFANEFEDQFDMTICSSVAMAVKDADIICTATNSTEPLIHFGDISPHAHINAIGSHHPSMKEISHDVLSRAVV
IADQLDAVLAESGEIISAVEHNHLKKESIIEIGQWLLQKNTDCKDKLTVFKSVGLAIQDLSVANAVYQNALKKNLGELFS
IS

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=296, Percent_Identity=33.1081081081081, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI62241008, Length=275, Percent_Identity=33.8181818181818, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24642678, Length=304, Percent_Identity=28.9473684210526, Blast_Score=116, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 35048; Mature: 34916

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRILSLSDVKHSITMHQAISALESAFIQLANNTVKLPLRTGVTIEEENGLMLTMPGYL
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCEEEEECCHH
AQEKSLGLKVVSIFPENLTKNKPTITGFIMLLDATTGEAKVLMDAAYLTSLRTGAVSGLA
HHHHCCCEEEEEECCHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
TKYFARDNATQVAIIGSGAQAKTQLEAVASVRDIQQVFVWSRNIKNAEKFANEFEDQFDM
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TICSSVAMAVKDADIICTATNSTEPLIHFGDISPHAHINAIGSHHPSMKEISHDVLSRAV
HHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
VIADQLDAVLAESGEIISAVEHNHLKKESIIEIGQWLLQKNTDCKDKLTVFKSVGLAIQD
HHHHHHHHHHHCCCCEEHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
LSVANAVYQNALKKNLGELFSIS
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLRILSLSDVKHSITMHQAISALESAFIQLANNTVKLPLRTGVTIEEENGLMLTMPGYL
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCCEEEEECCHH
AQEKSLGLKVVSIFPENLTKNKPTITGFIMLLDATTGEAKVLMDAAYLTSLRTGAVSGLA
HHHHCCCEEEEEECCHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
TKYFARDNATQVAIIGSGAQAKTQLEAVASVRDIQQVFVWSRNIKNAEKFANEFEDQFDM
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TICSSVAMAVKDADIICTATNSTEPLIHFGDISPHAHINAIGSHHPSMKEISHDVLSRAV
HHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
VIADQLDAVLAESGEIISAVEHNHLKKESIIEIGQWLLQKNTDCKDKLTVFKSVGLAIQD
HHHHHHHHHHHCCCCEEHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH
LSVANAVYQNALKKNLGELFSIS
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]