Click here to switch to the map view.

The map label for this gene is 54295035

Identifier: 54295035

GI number: 54295035

Start: 2416375

End: 2418216

Strand: Reverse

Name: 54295035

Synonym: lpl2115

Alternate gene names: NA

Gene position: 2418216-2416375 (Counterclockwise)

Preceding gene: 54295039

Following gene: 54295033

Centisome position: 72.28

GC content: 34.58

Gene sequence:

>1842_bases
ATGCCAAAACATCTTTTCTATGGTGTATTTCTTATTTTATTGAGTATGAAAGCCTACACTCAGGATGCTGTTAGCAGAGA
TGTTGCAAAGCGAACCGAATCCATTGAAAAAAAGGGTATTGTCTATCACAATGTTATTGATTGTGATTATAAAATCTCAC
CTGAAATTTCTCATATTGATTCGGATATCATTTTAAATTGGGCTGAATATGCGGCTATTCTGTCTTTTAATTTCAATTTT
GCGTCTATTGAGGACCAATTAAATCAATTGCACTCTTGTTATACTGAAAAGGGGTGGGGGCAAATGCAAAATGCTTTACA
TAAATCAAATAATATAGAAACTATTAAAGCAGAAAAATTAAAAGTAAAGGGCTATAAAGATGGGGAGGCTCAAATAATAG
AGGTTTTGGATAATCGATGGAAAATTATATTGCCCTTAAAAGTTGTTTATGAGAATGATAAAAAAAGAGTGACACACTTT
CTTAATGCCTATCTGACCATAGGCTGGAAAAATAAAGATAGTTTGGGGATTATGCAAATGATTGCTATTCCTCGTCTGGC
GCCACTAGCTCAGAAGGTGACACCAGCTGATGAGGTAATTAAAAGTATGAGCATAATACTGGCTGAGGGAAAAAAGGCCA
GTTTAGATAGTGCAAGAAAAATAACAGATTCCTTTTTTGTGCCTTTATTTTCAAATCATGGAGAATATTCTAAAAGAAAT
CTTGCTTTGAGTAACAGGGTTTCGCAAAGAGTGGCAATTATTCAACCAATGCCAAACTTAAATCCCATTCATAATCTTGT
GAGAATGCAATCATTTGATATGCCTGAATCTGCAAAAACTCCATATTTTGCTTTATCCCAACAGAGATCCCTTGTTAACG
ATTCTGATTCTAATAAAAGCACTCTGAGTGATTTTGGCAACAAAAGTCGGAAACTCTATCCAAACTGGTTAAGCCAGATC
GGTTTGCATTCTTCTAAATTACAACTTAATTCATTGATTACTCGAATTAACCCCTTGCCTTTATGGCGTGCTTTTTCTCA
ATATAAACAATCCATAAGAGACAAATCAGATAATATTGAGGCAATCAATAAGCAAAAGCCGATTTTAAGTGCTCAGATAG
AAGGAGAGCCCCAGTTTATAAAGGTTAAAGAAAATCAATGGGATGTTAAATTACCTATAAAAGTTGTTTATCAAAAAGAC
AATGAGAGAATAATTCAACGCCTTGATGTTAGTTTAGCTTTAGATCAAAAGATGGTAAATCACTTGACGGTAAAGAATAA
GAGCCTTGATTCTAACAGGGTATTACAATCTTTAAAATCGATACTGGCCTCATCTTCTCTTCAGCAATCGCCTCAATTGT
TCCTCGACTCTCAGAACAGTCAACTCAAACAATCTGAGCAATCACAATCAAAAGAAACGGTTTCTTGTCACTATAAAATC
CCTGCAGCAACTATAAAAACAGATAAAAATATTATTTTACAATGGGCGGAGTATGCTGCTATGCGGTCATTTCATTTCGA
TTACACGGCTTTGGAGGCAGAGCTAAAGGAATTAAAATCATGTTATACAAAAAAAGGATGGTCTGAATTTAATGCTGCTA
TGCATAAATCAGGTAACCTAAATGCAATTAAAACACAGAGACTAACCATGAATAGCCAAATTGATGGTCAAGCACGATTA
ATTGAATCTCAAGATAATCGATGGAAGATTCAATTACCTTTGAAAGTTGTATATAAAAATGATAGAGCGCAGGCTTCTCA
GTTTCTTGATATTCAATTGAATATAGTCAGAAAAATGAATGGTGAGCTCGGTATCGTGCAACTGATTGCTGTACTGAAGT
GA

Upstream 100 bases:

>100_bases
GTGACCGATTTTATCCGTAACTAACGTTAGAATAAATTAAATTATCCGATAAATTTGCACTTCGTAAGGGATTTGTAGAT
ACAGAATAAGGAATCTTTTT

Downstream 100 bases:

>100_bases
AGAATAACTCATATTGTGCTATTTTAATGAAGAGTTGTGATCAACATGAACTGTAGTCACATGAACACCAATAATAATGT
TATGTCAGGCGCCTGTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: IcmL-Like

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MPKHLFYGVFLILLSMKAYTQDAVSRDVAKRTESIEKKGIVYHNVIDCDYKISPEISHIDSDIILNWAEYAAILSFNFNF
ASIEDQLNQLHSCYTEKGWGQMQNALHKSNNIETIKAEKLKVKGYKDGEAQIIEVLDNRWKIILPLKVVYENDKKRVTHF
LNAYLTIGWKNKDSLGIMQMIAIPRLAPLAQKVTPADEVIKSMSIILAEGKKASLDSARKITDSFFVPLFSNHGEYSKRN
LALSNRVSQRVAIIQPMPNLNPIHNLVRMQSFDMPESAKTPYFALSQQRSLVNDSDSNKSTLSDFGNKSRKLYPNWLSQI
GLHSSKLQLNSLITRINPLPLWRAFSQYKQSIRDKSDNIEAINKQKPILSAQIEGEPQFIKVKENQWDVKLPIKVVYQKD
NERIIQRLDVSLALDQKMVNHLTVKNKSLDSNRVLQSLKSILASSSLQQSPQLFLDSQNSQLKQSEQSQSKETVSCHYKI
PAATIKTDKNIILQWAEYAAMRSFHFDYTALEAELKELKSCYTKKGWSEFNAAMHKSGNLNAIKTQRLTMNSQIDGQARL
IESQDNRWKIQLPLKVVYKNDRAQASQFLDIQLNIVRKMNGELGIVQLIAVLK

Sequences:

>Translated_613_residues
MPKHLFYGVFLILLSMKAYTQDAVSRDVAKRTESIEKKGIVYHNVIDCDYKISPEISHIDSDIILNWAEYAAILSFNFNF
ASIEDQLNQLHSCYTEKGWGQMQNALHKSNNIETIKAEKLKVKGYKDGEAQIIEVLDNRWKIILPLKVVYENDKKRVTHF
LNAYLTIGWKNKDSLGIMQMIAIPRLAPLAQKVTPADEVIKSMSIILAEGKKASLDSARKITDSFFVPLFSNHGEYSKRN
LALSNRVSQRVAIIQPMPNLNPIHNLVRMQSFDMPESAKTPYFALSQQRSLVNDSDSNKSTLSDFGNKSRKLYPNWLSQI
GLHSSKLQLNSLITRINPLPLWRAFSQYKQSIRDKSDNIEAINKQKPILSAQIEGEPQFIKVKENQWDVKLPIKVVYQKD
NERIIQRLDVSLALDQKMVNHLTVKNKSLDSNRVLQSLKSILASSSLQQSPQLFLDSQNSQLKQSEQSQSKETVSCHYKI
PAATIKTDKNIILQWAEYAAMRSFHFDYTALEAELKELKSCYTKKGWSEFNAAMHKSGNLNAIKTQRLTMNSQIDGQARL
IESQDNRWKIQLPLKVVYKNDRAQASQFLDIQLNIVRKMNGELGIVQLIAVLK
>Mature_612_residues
PKHLFYGVFLILLSMKAYTQDAVSRDVAKRTESIEKKGIVYHNVIDCDYKISPEISHIDSDIILNWAEYAAILSFNFNFA
SIEDQLNQLHSCYTEKGWGQMQNALHKSNNIETIKAEKLKVKGYKDGEAQIIEVLDNRWKIILPLKVVYENDKKRVTHFL
NAYLTIGWKNKDSLGIMQMIAIPRLAPLAQKVTPADEVIKSMSIILAEGKKASLDSARKITDSFFVPLFSNHGEYSKRNL
ALSNRVSQRVAIIQPMPNLNPIHNLVRMQSFDMPESAKTPYFALSQQRSLVNDSDSNKSTLSDFGNKSRKLYPNWLSQIG
LHSSKLQLNSLITRINPLPLWRAFSQYKQSIRDKSDNIEAINKQKPILSAQIEGEPQFIKVKENQWDVKLPIKVVYQKDN
ERIIQRLDVSLALDQKMVNHLTVKNKSLDSNRVLQSLKSILASSSLQQSPQLFLDSQNSQLKQSEQSQSKETVSCHYKIP
AATIKTDKNIILQWAEYAAMRSFHFDYTALEAELKELKSCYTKKGWSEFNAAMHKSGNLNAIKTQRLTMNSQIDGQARLI
ESQDNRWKIQLPLKVVYKNDRAQASQFLDIQLNIVRKMNGELGIVQLIAVLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70088; Mature: 69956

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKHLFYGVFLILLSMKAYTQDAVSRDVAKRTESIEKKGIVYHNVIDCDYKISPEISHID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCHHHCC
SDIILNWAEYAAILSFNFNFASIEDQLNQLHSCYTEKGWGQMQNALHKSNNIETIKAEKL
HHHEEEHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECEE
KVKGYKDGEAQIIEVLDNRWKIILPLKVVYENDKKRVTHFLNAYLTIGWKNKDSLGIMQM
EECCCCCCHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHHHEEEEECCCCCHHHHHH
IAIPRLAPLAQKVTPADEVIKSMSIILAEGKKASLDSARKITDSFFVPLFSNHGEYSKRN
HHHCCHHHHHHHCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHEEHHHCCCCCCCHHH
LALSNRVSQRVAIIQPMPNLNPIHNLVRMQSFDMPESAKTPYFALSQQRSLVNDSDSNKS
HHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHCCCCCCCHH
TLSDFGNKSRKLYPNWLSQIGLHSSKLQLNSLITRINPLPLWRAFSQYKQSIRDKSDNIE
HHHHHCCCCCEECHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCH
AINKQKPILSAQIEGEPQFIKVKENQWDVKLPIKVVYQKDNERIIQRLDVSLALDQKMVN
HHCCCCCEEEEEECCCCCEEEEECCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHH
HLTVKNKSLDSNRVLQSLKSILASSSLQQSPQLFLDSQNSQLKQSEQSQSKETVSCHYKI
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCEEEEEEEC
PAATIKTDKNIILQWAEYAAMRSFHFDYTALEAELKELKSCYTKKGWSEFNAAMHKSGNL
CCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
NAIKTQRLTMNSQIDGQARLIESQDNRWKIQLPLKVVYKNDRAQASQFLDIQLNIVRKMN
CEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEEEEEEECCHHHHHHHHHHEEEEHHHCC
GELGIVQLIAVLK
CCHHHHHHHHHHC
>Mature Secondary Structure 
PKHLFYGVFLILLSMKAYTQDAVSRDVAKRTESIEKKGIVYHNVIDCDYKISPEISHID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCEEECCCHHHCC
SDIILNWAEYAAILSFNFNFASIEDQLNQLHSCYTEKGWGQMQNALHKSNNIETIKAEKL
HHHEEEHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECEE
KVKGYKDGEAQIIEVLDNRWKIILPLKVVYENDKKRVTHFLNAYLTIGWKNKDSLGIMQM
EECCCCCCHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHHHEEEEECCCCCHHHHHH
IAIPRLAPLAQKVTPADEVIKSMSIILAEGKKASLDSARKITDSFFVPLFSNHGEYSKRN
HHHCCHHHHHHHCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHEEHHHCCCCCCCHHH
LALSNRVSQRVAIIQPMPNLNPIHNLVRMQSFDMPESAKTPYFALSQQRSLVNDSDSNKS
HHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHCCCCCCCHH
TLSDFGNKSRKLYPNWLSQIGLHSSKLQLNSLITRINPLPLWRAFSQYKQSIRDKSDNIE
HHHHHCCCCCEECHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCH
AINKQKPILSAQIEGEPQFIKVKENQWDVKLPIKVVYQKDNERIIQRLDVSLALDQKMVN
HHCCCCCEEEEEECCCCCEEEEECCCCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHH
HLTVKNKSLDSNRVLQSLKSILASSSLQQSPQLFLDSQNSQLKQSEQSQSKETVSCHYKI
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCEEEEEEEC
PAATIKTDKNIILQWAEYAAMRSFHFDYTALEAELKELKSCYTKKGWSEFNAAMHKSGNL
CCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
NAIKTQRLTMNSQIDGQARLIESQDNRWKIQLPLKVVYKNDRAQASQFLDIQLNIVRKMN
CEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEEEEEEECCHHHHHHHHHHEEEEHHHCC
GELGIVQLIAVLK
CCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA