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The map label for this gene is 54295008

Identifier: 54295008

GI number: 54295008

Start: 2367287

End: 2368654

Strand: Reverse

Name: 54295008

Synonym: lpl2088

Alternate gene names: NA

Gene position: 2368654-2367287 (Counterclockwise)

Preceding gene: 54295011

Following gene: 54295007

Centisome position: 70.8

GC content: 37.57

Gene sequence:

>1368_bases
ATGAGATATGCAGTTACCTATTGTGCAATGGATCATGAGTTTAGTGGTAATCCTTTTTGGCATAGTTGCATTTTATTATC
TCAATGGGATGACAATGGAAAGATTGAGGTAGTCGATAATTGGGGTTTTTATGGGGTGCCATCTACTGTTCGCGATACGT
GGTTAAGTAAACTGAAAATCAAGTTGGGTTTGGATGTTGATTTGAAGGGCAATCATGGTATGTTACGACACGAAGAACTG
CGTTATCTGGATGTTGGCTATGGTTTACATGGAGTTACTTTTGAGTTAACCAGGGAAAAATTTGATTTACTGCAGTTGAA
ATGCCAAACAATGTTGGAAGAACAGAAGCAAGCCGTTAAGGAAGTTGTTGAATCACAGGGGATTGCTGGCAAACAAAAAT
ACCGTATTTATGAGCATGAAGAGTATTCCCCGTTAATTTTTGCTTTGGAAAAAATCAAGGCAACACAAAAAGGCCATCGG
CCAAGGCTTAAACCATTTGAGTTAAATTTGTCATTTACCTTGTGGGGGCCGGCTTTAAATCAATCCTATACTTGTAAATC
ACTGATGGTTGATCTGTTAAAAGGTATACTAACTCAAGAGCAAATTGCCCGAATTACTGAAGAGGGGAAACACCCTACCG
TACCAAGATACAGTGGTAAATTGGAAAAAATTTATTTGCATAGCAGTGGACCATTACGTGAACATAAAAAATCTTCCGGT
GCGATTGTTCATTATCGTGATTTACAAGACGAGGGAGTCAAATTACATTGGACATTACCTCCACAAGAAATTGAAGCCTT
ATCCGGAGATACCATCAAATTACTGGAAATAAGTGAGGAGTATTGTGATGAGGTAAAACAAACGATAAGCAAGCTGCAAA
AATTGGAGTGGTTATTTATTGATGCCAAACTGCCTGAGAAATATCACTCTTATCAAGAAGATTTGATTGCTCGTATTCGG
CAATGTTATGAAGCTTTTGCTGAGGTTGAACCTAAAAAGGCCAAATCAACAACCACAGGCTGGATGGGATTTGCTTTGTC
ATTGTTCTCTTTGCCAAAAGATCTGGATGAAAAGAGTCTTTTACAGAAATTAAACAATGCGAAATATCTGATTAACAGCC
TTTACATGGCTATTGTTGATTATTGGAAAATTTATGATGATTGGCCATCTGAAACTAAAACAGACTCTACTGACTATAAT
CCTCTTGAAGCTTTGGCTGCTTATTTATGTGAAGATGATAAGAAGAAACTTTGTAAGATTATTGGACGAAATTATCTGGA
TCCTTCATCAGAAGAGGAATTTGATAATATTGAAGAGAGCGAATGGAAGAATTCAGAGTTAGGGAGCGCTTCTGCCAGAA
CCATGTAA

Upstream 100 bases:

>100_bases
GTCAGTTTCAACCACTTTGCTGTTCTCAGCTAATCAATACCTGGATTTTGCCTGGTTATCCATGCAGATGTTTTTAATCA
ATCTTCTTAAGGATAAAATA

Downstream 100 bases:

>100_bases
AAAAGCCTGACTGACAGTTATCTTTTTAAAGTAGCAAGTGCGGACTAGCACGCTGGATCATATCTGCATTTGCATACTTA
TCGTTCCCATTGTGTTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MRYAVTYCAMDHEFSGNPFWHSCILLSQWDDNGKIEVVDNWGFYGVPSTVRDTWLSKLKIKLGLDVDLKGNHGMLRHEEL
RYLDVGYGLHGVTFELTREKFDLLQLKCQTMLEEQKQAVKEVVESQGIAGKQKYRIYEHEEYSPLIFALEKIKATQKGHR
PRLKPFELNLSFTLWGPALNQSYTCKSLMVDLLKGILTQEQIARITEEGKHPTVPRYSGKLEKIYLHSSGPLREHKKSSG
AIVHYRDLQDEGVKLHWTLPPQEIEALSGDTIKLLEISEEYCDEVKQTISKLQKLEWLFIDAKLPEKYHSYQEDLIARIR
QCYEAFAEVEPKKAKSTTTGWMGFALSLFSLPKDLDEKSLLQKLNNAKYLINSLYMAIVDYWKIYDDWPSETKTDSTDYN
PLEALAAYLCEDDKKKLCKIIGRNYLDPSSEEEFDNIEESEWKNSELGSASARTM

Sequences:

>Translated_455_residues
MRYAVTYCAMDHEFSGNPFWHSCILLSQWDDNGKIEVVDNWGFYGVPSTVRDTWLSKLKIKLGLDVDLKGNHGMLRHEEL
RYLDVGYGLHGVTFELTREKFDLLQLKCQTMLEEQKQAVKEVVESQGIAGKQKYRIYEHEEYSPLIFALEKIKATQKGHR
PRLKPFELNLSFTLWGPALNQSYTCKSLMVDLLKGILTQEQIARITEEGKHPTVPRYSGKLEKIYLHSSGPLREHKKSSG
AIVHYRDLQDEGVKLHWTLPPQEIEALSGDTIKLLEISEEYCDEVKQTISKLQKLEWLFIDAKLPEKYHSYQEDLIARIR
QCYEAFAEVEPKKAKSTTTGWMGFALSLFSLPKDLDEKSLLQKLNNAKYLINSLYMAIVDYWKIYDDWPSETKTDSTDYN
PLEALAAYLCEDDKKKLCKIIGRNYLDPSSEEEFDNIEESEWKNSELGSASARTM
>Mature_455_residues
MRYAVTYCAMDHEFSGNPFWHSCILLSQWDDNGKIEVVDNWGFYGVPSTVRDTWLSKLKIKLGLDVDLKGNHGMLRHEEL
RYLDVGYGLHGVTFELTREKFDLLQLKCQTMLEEQKQAVKEVVESQGIAGKQKYRIYEHEEYSPLIFALEKIKATQKGHR
PRLKPFELNLSFTLWGPALNQSYTCKSLMVDLLKGILTQEQIARITEEGKHPTVPRYSGKLEKIYLHSSGPLREHKKSSG
AIVHYRDLQDEGVKLHWTLPPQEIEALSGDTIKLLEISEEYCDEVKQTISKLQKLEWLFIDAKLPEKYHSYQEDLIARIR
QCYEAFAEVEPKKAKSTTTGWMGFALSLFSLPKDLDEKSLLQKLNNAKYLINSLYMAIVDYWKIYDDWPSETKTDSTDYN
PLEALAAYLCEDDKKKLCKIIGRNYLDPSSEEEFDNIEESEWKNSELGSASARTM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52653; Mature: 52653

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYAVTYCAMDHEFSGNPFWHSCILLSQWDDNGKIEVVDNWGFYGVPSTVRDTWLSKLKI
CCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHEEE
KLGLDVDLKGNHGMLRHEELRYLDVGYGLHGVTFELTREKFDLLQLKCQTMLEEQKQAVK
EECCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
EVVESQGIAGKQKYRIYEHEEYSPLIFALEKIKATQKGHRPRLKPFELNLSFTLWGPALN
HHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCC
QSYTCKSLMVDLLKGILTQEQIARITEEGKHPTVPRYSGKLEKIYLHSSGPLREHKKSSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCC
AIVHYRDLQDEGVKLHWTLPPQEIEALSGDTIKLLEISEEYCDEVKQTISKLQKLEWLFI
CEEEEECCCCCCEEEEEECCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCEEEEE
DAKLPEKYHSYQEDLIARIRQCYEAFAEVEPKKAKSTTTGWMGFALSLFSLPKDLDEKSL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHH
LQKLNNAKYLINSLYMAIVDYWKIYDDWPSETKTDSTDYNPLEALAAYLCEDDKKKLCKI
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
IGRNYLDPSSEEEFDNIEESEWKNSELGSASARTM
HCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRYAVTYCAMDHEFSGNPFWHSCILLSQWDDNGKIEVVDNWGFYGVPSTVRDTWLSKLKI
CCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHEEE
KLGLDVDLKGNHGMLRHEELRYLDVGYGLHGVTFELTREKFDLLQLKCQTMLEEQKQAVK
EECCEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
EVVESQGIAGKQKYRIYEHEEYSPLIFALEKIKATQKGHRPRLKPFELNLSFTLWGPALN
HHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCC
QSYTCKSLMVDLLKGILTQEQIARITEEGKHPTVPRYSGKLEKIYLHSSGPLREHKKSSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCC
AIVHYRDLQDEGVKLHWTLPPQEIEALSGDTIKLLEISEEYCDEVKQTISKLQKLEWLFI
CEEEEECCCCCCEEEEEECCHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCEEEEE
DAKLPEKYHSYQEDLIARIRQCYEAFAEVEPKKAKSTTTGWMGFALSLFSLPKDLDEKSL
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHH
LQKLNNAKYLINSLYMAIVDYWKIYDDWPSETKTDSTDYNPLEALAAYLCEDDKKKLCKI
HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
IGRNYLDPSSEEEFDNIEESEWKNSELGSASARTM
HCCCCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA