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The map label for this gene is 54294848

Identifier: 54294848

GI number: 54294848

Start: 2164842

End: 2165246

Strand: Reverse

Name: 54294848

Synonym: lpl1927

Alternate gene names: NA

Gene position: 2165246-2164842 (Counterclockwise)

Preceding gene: 54294850

Following gene: 54294846

Centisome position: 64.72

GC content: 36.05

Gene sequence:

>405_bases
ATGACCAGTTTTTTTTTAAGAAAAAATATAACAAAGTCAGCTAAGGTATTATTGGAGAAAGAAGCGGAGAAGGTTTTCAG
TAGAAATGGGCAAGGGCTTACTTTTCTTGAAAAGGGTTATAAAGTAATGACTTATACCAAGCATCCTATACAAAACGATG
ATTTGATTTTAGCTTATTCTCCTAATGTCATTTATTCAAATGAAAGAATGAATAAAATTCGCGAAGTCATGCGCCGGAGA
CAATGTGGTTTTGCTCTTTTCAGAGTAAAAGAAGACACATTTTGCCAAGTAAAACAGTTAAAAAATTATCCTGAAGATCT
TGAGGCGAGGGATACATCCCAGTTTTTTGTCACCTCTGAGACTTTGGAGCCAGTGAAATTTCTCGAGTCATCTCCTCCCC
CATGA

Upstream 100 bases:

>100_bases
ATTATGTGACCGGATTTTTTAACCCGTATTTTTACGGTATTTCTTTAAATTTTTTCTCGGTAATAATTAGTAGGTTGTCA
TTGTCAGAAGAGAGTAAAAT

Downstream 100 bases:

>100_bases
GATTTTTACATACAGAACATTACCTCTACCTAGAGAATTGATTCAAACATGTCAGGATACTGGTGAAGCAATTTTGTAAT
AAGGAGTCCTTTGTTATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTSFFLRKNITKSAKVLLEKEAEKVFSRNGQGLTFLEKGYKVMTYTKHPIQNDDLILAYSPNVIYSNERMNKIREVMRRR
QCGFALFRVKEDTFCQVKQLKNYPEDLEARDTSQFFVTSETLEPVKFLESSPPP

Sequences:

>Translated_134_residues
MTSFFLRKNITKSAKVLLEKEAEKVFSRNGQGLTFLEKGYKVMTYTKHPIQNDDLILAYSPNVIYSNERMNKIREVMRRR
QCGFALFRVKEDTFCQVKQLKNYPEDLEARDTSQFFVTSETLEPVKFLESSPPP
>Mature_133_residues
TSFFLRKNITKSAKVLLEKEAEKVFSRNGQGLTFLEKGYKVMTYTKHPIQNDDLILAYSPNVIYSNERMNKIREVMRRRQ
CGFALFRVKEDTFCQVKQLKNYPEDLEARDTSQFFVTSETLEPVKFLESSPPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15711; Mature: 15580

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFFLRKNITKSAKVLLEKEAEKVFSRNGQGLTFLEKGYKVMTYTKHPIQNDDLILAYS
CCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHCCCEEEEEECCCCCCCCEEEEEC
PNVIYSNERMNKIREVMRRRQCGFALFRVKEDTFCQVKQLKNYPEDLEARDTSQFFVTSE
CCEEECCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEECC
TLEPVKFLESSPPP
CHHHHHHHCCCCCC
>Mature Secondary Structure 
TSFFLRKNITKSAKVLLEKEAEKVFSRNGQGLTFLEKGYKVMTYTKHPIQNDDLILAYS
CCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHCCCEEEEEECCCCCCCCEEEEEC
PNVIYSNERMNKIREVMRRRQCGFALFRVKEDTFCQVKQLKNYPEDLEARDTSQFFVTSE
CCEEECCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEECC
TLEPVKFLESSPPP
CHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA