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The map label for this gene is cpdP [H]

Identifier: 54294838

GI number: 54294838

Start: 2150521

End: 2151504

Strand: Reverse

Name: cpdP [H]

Synonym: lpl1916

Alternate gene names: 54294838

Gene position: 2151504-2150521 (Counterclockwise)

Preceding gene: 54294839

Following gene: 54294835

Centisome position: 64.31

GC content: 37.2

Gene sequence:

>984_bases
ATGCGCCAGCTATTCATTACCATGTTTATTTTTTTATTATCTAATGCAGGATATTGTGCGCCTGTCTTTGAAATTATTCC
TCTTGGAGTCTATGGTGGTTTGAAAGATGGAAATTTATCAGCTTATTTAATAAAAGCCATCGAGAGCAAAAATTATACGG
CTCTTGATGGGGGTACTTTGGTGCGTGGGCTTGAAATCGCAGTGGATAGGCAATCTCTGCCTAATAAAAAGGTTGATGAT
TTGCTGCAAAAACATATACCAGCCTACCTTATTTCTCATGCCCATCTTGATCATGTCATGGGGCTTGTGATGGCGCAACC
CGAATTGCGAGAAAAACAAACCATTATGGCACGTGAAGAAACAATACAGGCATTGCAGAAAAATATTTTTAATTGGTCTG
TTTGGGGGAATTTTGGAGATAGCGGAGAAATCCCTCATTTGAATTATCAACATTATCAAACTATCCCATTACTAGAGTGG
GTTGCTATTCCTGATACAGATTTGCACGTTAAAGTGTTTCCTTTGAGTCATGGTGGAATGGCATCAAGCGCTTTCTTAAT
ACGTTATAAAACCGAATATGCCCTCTATTTTGGTGATACTGGCGCTGATCACATTGAAAAATCAACAAACCTGGAGAATA
TTTGGAAAGAAATTGCGCCACTTATAAGAAATAAACAGCTTCATGCCATCATGCTGGAGTGTTCATTTTTAAATTCACAA
CCGGATGACAAATTATTTGGTCATTTAAAACCAAACCTATTTATGTTGGAGTTGCGAAAATTAGCATCGATTGTTGATCC
TTCAGATTTTAGAAACTCACTACAAGGCTTACCCGTTGTTGTTACGCACATCAAACCCAGGTTAGCTGACTTTTCAAATT
CTAATGAAGATACGGAAAAACAGGTTATAATCGAATTATCTCAGGAAAATGATATTGGCGTAGAATTAATTAAACCAGAG
CAAGGTATCAAGTTAAGTTTGTAA

Upstream 100 bases:

>100_bases
TTATGATGTTGAACTTCCACCGTATAAATACGGTGATTGAAGCCAGGTTGAATAAGGTATTATTTTACAAACTGACCGAA
TTATTTGAAAGGAAATCCTC

Downstream 100 bases:

>100_bases
TTTGGCGTAACTTCTCGATAGCTGCCAACAGGGTCAATTCAATGCAGCTCTCCTGTATCCGCTCATAAGGTCCAGTTCAA
GAGCGTCCTTGCGTGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: 3':5'-CNP; PDEase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRQLFITMFIFLLSNAGYCAPVFEIIPLGVYGGLKDGNLSAYLIKAIESKNYTALDGGTLVRGLEIAVDRQSLPNKKVDD
LLQKHIPAYLISHAHLDHVMGLVMAQPELREKQTIMAREETIQALQKNIFNWSVWGNFGDSGEIPHLNYQHYQTIPLLEW
VAIPDTDLHVKVFPLSHGGMASSAFLIRYKTEYALYFGDTGADHIEKSTNLENIWKEIAPLIRNKQLHAIMLECSFLNSQ
PDDKLFGHLKPNLFMLELRKLASIVDPSDFRNSLQGLPVVVTHIKPRLADFSNSNEDTEKQVIIELSQENDIGVELIKPE
QGIKLSL

Sequences:

>Translated_327_residues
MRQLFITMFIFLLSNAGYCAPVFEIIPLGVYGGLKDGNLSAYLIKAIESKNYTALDGGTLVRGLEIAVDRQSLPNKKVDD
LLQKHIPAYLISHAHLDHVMGLVMAQPELREKQTIMAREETIQALQKNIFNWSVWGNFGDSGEIPHLNYQHYQTIPLLEW
VAIPDTDLHVKVFPLSHGGMASSAFLIRYKTEYALYFGDTGADHIEKSTNLENIWKEIAPLIRNKQLHAIMLECSFLNSQ
PDDKLFGHLKPNLFMLELRKLASIVDPSDFRNSLQGLPVVVTHIKPRLADFSNSNEDTEKQVIIELSQENDIGVELIKPE
QGIKLSL
>Mature_327_residues
MRQLFITMFIFLLSNAGYCAPVFEIIPLGVYGGLKDGNLSAYLIKAIESKNYTALDGGTLVRGLEIAVDRQSLPNKKVDD
LLQKHIPAYLISHAHLDHVMGLVMAQPELREKQTIMAREETIQALQKNIFNWSVWGNFGDSGEIPHLNYQHYQTIPLLEW
VAIPDTDLHVKVFPLSHGGMASSAFLIRYKTEYALYFGDTGADHIEKSTNLENIWKEIAPLIRNKQLHAIMLECSFLNSQ
PDDKLFGHLKPNLFMLELRKLASIVDPSDFRNSLQGLPVVVTHIKPRLADFSNSNEDTEKQVIIELSQENDIGVELIKPE
QGIKLSL

Specific function: Unknown

COG id: COG5212

COG function: function code T; Low-affinity cAMP phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cAMP phosphodiesterase class-II family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321189, Length=229, Percent_Identity=31.0043668122271, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000396 [H]

Pfam domain/function: PF02112 PDEase_II [H]

EC number: =3.1.4.17 [H]

Molecular weight: Translated: 36918; Mature: 36918

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLFITMFIFLLSNAGYCAPVFEIIPLGVYGGLKDGNLSAYLIKAIESKNYTALDGGTL
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCCEEECCCCE
VRGLEIAVDRQSLPNKKVDDLLQKHIPAYLISHAHLDHVMGLVMAQPELREKQTIMAREE
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TIQALQKNIFNWSVWGNFGDSGEIPHLNYQHYQTIPLLEWVAIPDTDLHVKVFPLSHGGM
HHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCC
ASSAFLIRYKTEYALYFGDTGADHIEKSTNLENIWKEIAPLIRNKQLHAIMLECSFLNSQ
CCCEEEEEEEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCC
PDDKLFGHLKPNLFMLELRKLASIVDPSDFRNSLQGLPVVVTHIKPRLADFSNSNEDTEK
CCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCE
QVIIELSQENDIGVELIKPEQGIKLSL
EEEEEECCCCCCCEEEECCCCCCEECC
>Mature Secondary Structure
MRQLFITMFIFLLSNAGYCAPVFEIIPLGVYGGLKDGNLSAYLIKAIESKNYTALDGGTL
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHEEEEECCCCCCEEECCCCE
VRGLEIAVDRQSLPNKKVDDLLQKHIPAYLISHAHLDHVMGLVMAQPELREKQTIMAREE
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TIQALQKNIFNWSVWGNFGDSGEIPHLNYQHYQTIPLLEWVAIPDTDLHVKVFPLSHGGM
HHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCC
ASSAFLIRYKTEYALYFGDTGADHIEKSTNLENIWKEIAPLIRNKQLHAIMLECSFLNSQ
CCCEEEEEEEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCC
PDDKLFGHLKPNLFMLELRKLASIVDPSDFRNSLQGLPVVVTHIKPRLADFSNSNEDTEK
CCHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCE
QVIIELSQENDIGVELIKPEQGIKLSL
EEEEEECCCCCCCEEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]