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The map label for this gene is ycaR [C]

Identifier: 54294807

GI number: 54294807

Start: 2109837

End: 2110016

Strand: Reverse

Name: ycaR [C]

Synonym: lpl1884

Alternate gene names: 54294807

Gene position: 2110016-2109837 (Counterclockwise)

Preceding gene: 54294808

Following gene: 54294806

Centisome position: 63.07

GC content: 33.89

Gene sequence:

>180_bases
GTGGATAAAAAATTATTGGAAATATTGGTTTGTCCTTTATGTAAAGGAAAATTGCTGTTTAAAAAACATGAACTGATCTG
CAAATTTGATAGGCTGGCATTTCCTGTTCGTGATGATATTCCTGTTATGCTGGAACAAGAAGCGCGTTTGATTCCTCTGG
AAGAGAAAGATAAATTATGA

Upstream 100 bases:

>100_bases
GCTATGATACGTTTGGCACAGAAAGCAAATATCAAGGCAGTTTCTGTGGCGCAGGCACAGCCAGTGTATGTGCGCAATCA
GGTTACTCAAGGAGATTCGC

Downstream 100 bases:

>100_bases
GCCATAATTTTCATGTAATTATACCAGCCAGATATCACTCCAGTCGTTTTCCAGGTAAATTACTTCAAGAAATTAACGGC
ATTACCGTGATTGAACGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MDKKLLEILVCPLCKGKLLFKKHELICKFDRLAFPVRDDIPVMLEQEARLIPLEEKDKL

Sequences:

>Translated_59_residues
MDKKLLEILVCPLCKGKLLFKKHELICKFDRLAFPVRDDIPVMLEQEARLIPLEEKDKL
>Mature_59_residues
MDKKLLEILVCPLCKGKLLFKKHELICKFDRLAFPVRDDIPVMLEQEARLIPLEEKDKL

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=58, Percent_Identity=58.6206896551724, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 6965; Mature: 6965

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKLLEILVCPLCKGKLLFKKHELICKFDRLAFPVRDDIPVMLEQEARLIPLEEKDKL
CCHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEECCCCEECCCCCCCCC
>Mature Secondary Structure
MDKKLLEILVCPLCKGKLLFKKHELICKFDRLAFPVRDDIPVMLEQEARLIPLEEKDKL
CCHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCEEECCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA