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The map label for this gene is flhF [H]

Identifier: 54294671

GI number: 54294671

Start: 1952001

End: 1953140

Strand: Reverse

Name: flhF [H]

Synonym: lpl1748

Alternate gene names: 54294671

Gene position: 1953140-1952001 (Counterclockwise)

Preceding gene: 54294672

Following gene: 54294670

Centisome position: 58.38

GC content: 40.53

Gene sequence:

>1140_bases
ATGAAATTAAAACGCTTTGTCGCTGCAGATACTCGCAGTGCCATGCAGCAAATAAAGGCTGCTTTTGGACCTGATGCTGT
TATTTTGTCAAGTCATAACATAAAAGATGGTGTTGAAATAGTTGCTGCTATTGATTTTGACGAAACAGTGATATCAACTC
AAGCTGCTGTAGCCATAGCAGAACCCCCAAGCCGAACAGAAAAATATTCAGCACAAACGCCATTAGACGACATGCGGCAA
GAAATTTTGACACTGAGAGGAATGCTGGAAGCACAGCTGCGTGGAAATATTGGGATTCATGAGCCTTTACATACAGTTAT
GCTGCAAAAACTCTTGTATTTAGGTGTTAGTCCCAATACGGCGACAATTTGGGCTCGCTCAGTAAAGCCTGATTTGAATC
AACAAAGAGCCTGGCAATTCATTTTGTCACAAGTGACAGAGCAATTGCCAATTCGTGATTCTAGTAGAATAGAAGAAGGT
GGTATCTACGCGTTTGTTGGTCCAACTGGAGTTGGTAAGACAACAACTCTAGCAAAAATTGCAGCACGCTTTGCTTTACG
TTTTGGCGCTGACAAGTTGGGTTTGGTCACTATGGATACCTACCGAATAGCAGCTCAGGAACAATTAATTCTCTATGGGA
AGATTTTGGGAGTTAAAGTATGTATCGCGCAGGATGAAGTCTCCTTGGCAAGAGTATTGCGTCAATTAAATGACAAAAAA
TTAATTTTGATTGATACAGCCGGGATGAATCCTTCTGATGAACGTGTAACCAAACAAATGACTGTTTTAAGTAATTATCT
GCAATCTATAGAAAAAGTATTGGTATTACCAGCTACCAGTCATTACCAGGTATTAATCGATGCGATTAAGCGTTACCAGG
CAAATCATGTAGATCAGTGCATTATTACGAAACTGGATGAATCTCTTGCAGTAGGTGGAGCCATAAGTGCTGTTATTGAA
TCAAATTTAGCTTTGGGTTATTTAACCGATGGACAACGAGTCCCTGAGGATATCAAAATTGCTACGCGTCACCAGCTTGT
TGAGTTATTTGCGCAACAAGAACTCCAGTTATTTCAGGAGGCAAGGGACATCAGCAAAATAAATCCGAATGTTAGGAGAG
AGAATTATGTCGAAGCTTAG

Upstream 100 bases:

>100_bases
TTGTCTTATCAGGAAATACCTGATAATAAACAAATAAGAATAATTGGAACTGTAGGTTAGTTTTTGGGGTTGCATAGGTG
TATTGAAGGCAGGAGGCATT

Downstream 100 bases:

>100_bases
CAAAGGTATAAAAGATCAGGCTTCTGGTCTTAGGAGTTTGTCCCGAAATAAACCTGTTAAAGTGATTGCTGTTTCGGCAG
GGAAAGGTGGTGTAGGCAAA

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIAEPPSRTEKYSAQTPLDDMRQ
EILTLRGMLEAQLRGNIGIHEPLHTVMLQKLLYLGVSPNTATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEG
GIYAFVGPTGVGKTTTLAKIAARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQCIITKLDESLAVGGAISAVIE
SNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQEARDISKINPNVRRENYVEA

Sequences:

>Translated_379_residues
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIAEPPSRTEKYSAQTPLDDMRQ
EILTLRGMLEAQLRGNIGIHEPLHTVMLQKLLYLGVSPNTATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEG
GIYAFVGPTGVGKTTTLAKIAARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQCIITKLDESLAVGGAISAVIE
SNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQEARDISKINPNVRRENYVEA
>Mature_379_residues
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIAEPPSRTEKYSAQTPLDDMRQ
EILTLRGMLEAQLRGNIGIHEPLHTVMLQKLLYLGVSPNTATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEG
GIYAFVGPTGVGKTTTLAKIAARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQCIITKLDESLAVGGAISAVIE
SNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQEARDISKINPNVRRENYVEA

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6325345, Length=211, Percent_Identity=26.0663507109005, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 42003; Mature: 42003

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHEEEEC
EPPSRTEKYSAQTPLDDMRQEILTLRGMLEAQLRGNIGIHEPLHTVMLQKLLYLGVSPNT
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
ATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEGGIYAFVGPTGVGKTTTLAKI
CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
AARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
HHHHHHHHCCCCCCEEEECHHHHHHHHHHHEEEHEEEEEEEEECCHHHHHHHHHHCCCCE
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQC
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHH
IITKLDESLAVGGAISAVIESNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQE
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARDISKINPNVRRENYVEA
HHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKLKRFVAADTRSAMQQIKAAFGPDAVILSSHNIKDGVEIVAAIDFDETVISTQAAVAIA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHHEEEEC
EPPSRTEKYSAQTPLDDMRQEILTLRGMLEAQLRGNIGIHEPLHTVMLQKLLYLGVSPNT
CCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
ATIWARSVKPDLNQQRAWQFILSQVTEQLPIRDSSRIEEGGIYAFVGPTGVGKTTTLAKI
CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
AARFALRFGADKLGLVTMDTYRIAAQEQLILYGKILGVKVCIAQDEVSLARVLRQLNDKK
HHHHHHHHCCCCCCEEEECHHHHHHHHHHHEEEHEEEEEEEEECCHHHHHHHHHHCCCCE
LILIDTAGMNPSDERVTKQMTVLSNYLQSIEKVLVLPATSHYQVLIDAIKRYQANHVDQC
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHH
IITKLDESLAVGGAISAVIESNLALGYLTDGQRVPEDIKIATRHQLVELFAQQELQLFQE
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARDISKINPNVRRENYVEA
HHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]