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The map label for this gene is fliE [H]

Identifier: 54294648

GI number: 54294648

Start: 1927290

End: 1927604

Strand: Reverse

Name: fliE [H]

Synonym: lpl1725

Alternate gene names: 54294648

Gene position: 1927604-1927290 (Counterclockwise)

Preceding gene: 54294649

Following gene: 54294647

Centisome position: 57.61

GC content: 36.51

Gene sequence:

>315_bases
ATGAGCGATATTAATACAGTAAATTTAATTAATCAAATGAAAACTCTGGCTGCCCAGGCTGAGGGGATAAAACCGGATTC
TGGTTTAAATCACACTTCTTTCAGTTCGGTTTTTCAACAGGCATTAAATCAAGTCAATGAATTATCACAAACAGCAGATA
GTTTAAAGACCCGCTTTGAAATAGGCGATCCTAATGTGTCCTTGGGAGAAGTAATGATAGCAAGTCAAAAATCCAATTTA
GGGTTTGAGGCGACATTAAGAGTTAGAAACAAATTCGTACAAGCATACCAGGATATTATGAACATGCCAGTTTAG

Upstream 100 bases:

>100_bases
AAAAAGTTGCTGCGTTATTGGGGGTTAGCGAAAGGACTTTGCGTTATAAACTCGCAAAAATGCGTGAAGAAGGGTATGTG
GTTTAATAGGGGCTGAGAGA

Downstream 100 bases:

>100_bases
TACAATGTTTTGGGTAGTAGAACTTTTTCAACAGATAAACATGATCAAACTCAATAACAGGTTTTTATGGGGTTTTTGAA
TACCATAATGAGTTTGCAAA

Product: flagellar hook-basal body complex protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSDINTVNLINQMKTLAAQAEGIKPDSGLNHTSFSSVFQQALNQVNELSQTADSLKTRFEIGDPNVSLGEVMIASQKSNL
GFEATLRVRNKFVQAYQDIMNMPV

Sequences:

>Translated_104_residues
MSDINTVNLINQMKTLAAQAEGIKPDSGLNHTSFSSVFQQALNQVNELSQTADSLKTRFEIGDPNVSLGEVMIASQKSNL
GFEATLRVRNKFVQAYQDIMNMPV
>Mature_103_residues
SDINTVNLINQMKTLAAQAEGIKPDSGLNHTSFSSVFQQALNQVNELSQTADSLKTRFEIGDPNVSLGEVMIASQKSNLG
FEATLRVRNKFVQAYQDIMNMPV

Specific function: Unknown

COG id: COG1677

COG function: function code NU; Flagellar hook-basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliE family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001624 [H]

Pfam domain/function: PF02049 FliE [H]

EC number: NA

Molecular weight: Translated: 11448; Mature: 11317

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDINTVNLINQMKTLAAQAEGIKPDSGLNHTSFSSVFQQALNQVNELSQTADSLKTRFE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IGDPNVSLGEVMIASQKSNLGFEATLRVRNKFVQAYQDIMNMPV
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDINTVNLINQMKTLAAQAEGIKPDSGLNHTSFSSVFQQALNQVNELSQTADSLKTRFE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IGDPNVSLGEVMIASQKSNLGFEATLRVRNKFVQAYQDIMNMPV
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA