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The map label for this gene is yfiH [H]

Identifier: 54294220

GI number: 54294220

Start: 1435950

End: 1436675

Strand: Reverse

Name: yfiH [H]

Synonym: lpl1285

Alternate gene names: 54294220

Gene position: 1436675-1435950 (Counterclockwise)

Preceding gene: 54294221

Following gene: 54294219

Centisome position: 42.94

GC content: 38.15

Gene sequence:

>726_bases
ATGAAAAATAGATTTGCCAATTGGCCGGCTCCTGAAAATATTACTGCTTTGAGTACTACCCGTTTGTATGGTTTCAGTAA
CGGACCCTATGCGAGCAACAACCTTGGGTTGCATGTTGGTGATAACCAACAGCATGTACTCAAAAACAGACAACAGCTCA
TTGAACTTATTGATCTGCCTGCAGAACCAATCTGGCTGGAACAAACACATAGCACAAAATGCATCACGGTAGAAACTGAA
AAAACCAGAGATGCTGATGCTGCAATTACTCGTTTACCTAAACTCCCTTTAGTCATTATGACAGCAGATTGCCTACCCAT
ATTGCTATGCAATCGACAGGGAACTGAAATTGCCGCCATTCATGCTGGATGGAAAGGTCTGTATAATGGTATTATTGAAA
ATACACTAAAGAAGCTCAATAGCAATAGGACAGATATAATTGCCTGGATAGGCCCTGCTATCTGTAAAAAATGTTATGAA
GTGGGTGAAGAAGTTTATCTGTCTTTTACCAATAAATACTCCTTAACCAGGAATGCGTTTGAGCCTGTTCATAGCAAATG
GTTAGCTGATTTACCTCAAATTGCAGAAATAGTACTTAATTTGGAAGGGGTAAAATCAGTATTTCAGTCAAATTTGTGTA
CTTTTGAGTTAAAAAATGAATTCTATTCCTATCGCAGAGAATCACAAACAGGTAGAATAGGTACTTTCATCTGGATTAAT
GAGTAA

Upstream 100 bases:

>100_bases
TCCATTTCATTTTGTCATCCTGTAAAAAATACAGAAATAACACTGAATGCATTATTACCCGATGATTTCGAACTCTTGTT
AAACACTCTGGATCAACACG

Downstream 100 bases:

>100_bases
AATCAGGATTAATAATATGATTACACGTATAAAATTATTCATAGCAAGTCTGCTTGTATTTTTCATCCCGGTAGCCGATG
CAGCACAAGATCTTACAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKNRFANWPAPENITALSTTRLYGFSNGPYASNNLGLHVGDNQQHVLKNRQQLIELIDLPAEPIWLEQTHSTKCITVETE
KTRDADAAITRLPKLPLVIMTADCLPILLCNRQGTEIAAIHAGWKGLYNGIIENTLKKLNSNRTDIIAWIGPAICKKCYE
VGEEVYLSFTNKYSLTRNAFEPVHSKWLADLPQIAEIVLNLEGVKSVFQSNLCTFELKNEFYSYRRESQTGRIGTFIWIN
E

Sequences:

>Translated_241_residues
MKNRFANWPAPENITALSTTRLYGFSNGPYASNNLGLHVGDNQQHVLKNRQQLIELIDLPAEPIWLEQTHSTKCITVETE
KTRDADAAITRLPKLPLVIMTADCLPILLCNRQGTEIAAIHAGWKGLYNGIIENTLKKLNSNRTDIIAWIGPAICKKCYE
VGEEVYLSFTNKYSLTRNAFEPVHSKWLADLPQIAEIVLNLEGVKSVFQSNLCTFELKNEFYSYRRESQTGRIGTFIWIN
E
>Mature_241_residues
MKNRFANWPAPENITALSTTRLYGFSNGPYASNNLGLHVGDNQQHVLKNRQQLIELIDLPAEPIWLEQTHSTKCITVETE
KTRDADAAITRLPKLPLVIMTADCLPILLCNRQGTEIAAIHAGWKGLYNGIIENTLKKLNSNRTDIIAWIGPAICKKCYE
VGEEVYLSFTNKYSLTRNAFEPVHSKWLADLPQIAEIVLNLEGVKSVFQSNLCTFELKNEFYSYRRESQTGRIGTFIWIN
E

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=235, Percent_Identity=43.4042553191489, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27342; Mature: 27342

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRFANWPAPENITALSTTRLYGFSNGPYASNNLGLHVGDNQQHVLKNRQQLIELIDLP
CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCC
AEPIWLEQTHSTKCITVETEKTRDADAAITRLPKLPLVIMTADCLPILLCNRQGTEIAAI
CCCEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEEEEE
HAGWKGLYNGIIENTLKKLNSNRTDIIAWIGPAICKKCYEVGEEVYLSFTNKYSLTRNAF
EHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHEEEEECCCCHHHHHHH
EPVHSKWLADLPQIAEIVLNLEGVKSVFQSNLCTFELKNEFYSYRRESQTGRIGTFIWIN
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCEEEEEEEE
E
C
>Mature Secondary Structure
MKNRFANWPAPENITALSTTRLYGFSNGPYASNNLGLHVGDNQQHVLKNRQQLIELIDLP
CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCC
AEPIWLEQTHSTKCITVETEKTRDADAAITRLPKLPLVIMTADCLPILLCNRQGTEIAAI
CCCEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCEEEEECCCCCEEEEE
HAGWKGLYNGIIENTLKKLNSNRTDIIAWIGPAICKKCYEVGEEVYLSFTNKYSLTRNAF
EHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHEEEEECCCCHHHHHHH
EPVHSKWLADLPQIAEIVLNLEGVKSVFQSNLCTFELKNEFYSYRRESQTGRIGTFIWIN
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCEEEEEEEE
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906060; 9205837; 9278503; 2066329 [H]