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The map label for this gene is 54294218

Identifier: 54294218

GI number: 54294218

Start: 1432827

End: 1433963

Strand: Reverse

Name: 54294218

Synonym: lpl1283

Alternate gene names: NA

Gene position: 1433963-1432827 (Counterclockwise)

Preceding gene: 54294219

Following gene: 54294217

Centisome position: 42.86

GC content: 38.79

Gene sequence:

>1137_bases
TTGTTCAGGATTAACTTAATACGATATGTGGCACTTCTGTTTATTATTACATTGAATTTAGATTGTATTAGCGTTGCATT
TTCATCTCAGGTAATTTATGGAACACAAAATGCTGCACGAGTTACTGGAAAAAGTCTGAAAAGAATTTATTTTCTTCAGT
TAGGCGCTTTTAGCCAAAAAAGCAATGCTCAGCAATTGGCAAGAAAAGTTCAAGCGAGAACACAATACCCTGTAATAATT
AGTCATTCAGGCAATGCTTTCTCGGTTCGTGTGGGGCCTGTCAATACGCAAGAACTGCATCAACTCAGCATAAAACTTTC
ACAAAATTCAAATCTTGCTCTGATAAACCATCACTCATCACCAAAGCAGGCACTTAATATTAAGTCAAAACCGCAAATCC
CTGTTAAGGAAACTTCTCGCCCTCCTTCAACTCATTCAGTAGCTAAAGAAATGGTGGATAAGAAAGGAAGTTGGTATGTA
GCTGCTAAAATTGGAGGACAAGAAACAACGCCGGATGATCAGTTTACCGTAAATAATGACAGTGGTTTTGCCAGCCCTTT
TGATAAAGATATTTATACCAACAGTTCCGATTCCTCCTTAGTCTTAGGTATTGGCGGAGGCTATCGATTTACAAATATGA
TTCTCCCTGCGATTTCGGTTGGAATATACTATTCCCATTTCTTTAATATGGACATTAATGGACAGGTGATTCAGTACAGC
TTGCCCGAATTCACCAATTATAATTATCAATGGAAAGTAAAATCTGATTTGGTTTTAGCTTCTGTAAAAGCCAATATCTT
TCGCTGGAAAAATTTAATGCCATTTGTACAAGGAGGCGTTGGAGCGAGCTCCAATCGAGCCAGTCAATATTATGAGAATG
CCTTGCCTGATGTCACACCTCGTATCAGTCCTAATTTTGCCAATCATACGACTACTGTGATTGCTTACCAACTGGGAGCT
GGTCTGGATTGGGAAATAAAGCCTCAATGGCTGCTTTCCTTGGGATACGAATATTCCGATTTAGGAAAAGTACGTTCTGG
TTATGGTACTGATAGCTGGGGTAGAGAGACATTGTCCTCGAAAAATTTGACAAGCAATGCAGGAACATTAGGCTTTACCT
ATTTGTTTCATGGTTAA

Upstream 100 bases:

>100_bases
TCAGTCCCTTCGCCGAAATAATATTTGAGATCATCTTGCATCACGAAAAGAAATTATAGTAGCATCGTTGCTCATCACAT
TTCATAATACGGATTTTATT

Downstream 100 bases:

>100_bases
TCAAATATGAGGCACAAGCTAAAACTCCAAATATTGAGAAACCAGAAATTACCTTTGGCTTTCCAGCGGTAATTTATCCA
AGATGACTGATTTAATCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MFRINLIRYVALLFIITLNLDCISVAFSSQVIYGTQNAARVTGKSLKRIYFLQLGAFSQKSNAQQLARKVQARTQYPVII
SHSGNAFSVRVGPVNTQELHQLSIKLSQNSNLALINHHSSPKQALNIKSKPQIPVKETSRPPSTHSVAKEMVDKKGSWYV
AAKIGGQETTPDDQFTVNNDSGFASPFDKDIYTNSSDSSLVLGIGGGYRFTNMILPAISVGIYYSHFFNMDINGQVIQYS
LPEFTNYNYQWKVKSDLVLASVKANIFRWKNLMPFVQGGVGASSNRASQYYENALPDVTPRISPNFANHTTTVIAYQLGA
GLDWEIKPQWLLSLGYEYSDLGKVRSGYGTDSWGRETLSSKNLTSNAGTLGFTYLFHG

Sequences:

>Translated_378_residues
MFRINLIRYVALLFIITLNLDCISVAFSSQVIYGTQNAARVTGKSLKRIYFLQLGAFSQKSNAQQLARKVQARTQYPVII
SHSGNAFSVRVGPVNTQELHQLSIKLSQNSNLALINHHSSPKQALNIKSKPQIPVKETSRPPSTHSVAKEMVDKKGSWYV
AAKIGGQETTPDDQFTVNNDSGFASPFDKDIYTNSSDSSLVLGIGGGYRFTNMILPAISVGIYYSHFFNMDINGQVIQYS
LPEFTNYNYQWKVKSDLVLASVKANIFRWKNLMPFVQGGVGASSNRASQYYENALPDVTPRISPNFANHTTTVIAYQLGA
GLDWEIKPQWLLSLGYEYSDLGKVRSGYGTDSWGRETLSSKNLTSNAGTLGFTYLFHG
>Mature_378_residues
MFRINLIRYVALLFIITLNLDCISVAFSSQVIYGTQNAARVTGKSLKRIYFLQLGAFSQKSNAQQLARKVQARTQYPVII
SHSGNAFSVRVGPVNTQELHQLSIKLSQNSNLALINHHSSPKQALNIKSKPQIPVKETSRPPSTHSVAKEMVDKKGSWYV
AAKIGGQETTPDDQFTVNNDSGFASPFDKDIYTNSSDSSLVLGIGGGYRFTNMILPAISVGIYYSHFFNMDINGQVIQYS
LPEFTNYNYQWKVKSDLVLASVKANIFRWKNLMPFVQGGVGASSNRASQYYENALPDVTPRISPNFANHTTTVIAYQLGA
GLDWEIKPQWLLSLGYEYSDLGKVRSGYGTDSWGRETLSSKNLTSNAGTLGFTYLFHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41943; Mature: 41943

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRINLIRYVALLFIITLNLDCISVAFSSQVIYGTQNAARVTGKSLKRIYFLQLGAFSQK
CEEEHHHHHHHHHHHHHCCCHHEEEEECCEEEEECCCHHHHHHHHHHEEEEEEECCCCCC
SNAQQLARKVQARTQYPVIISHSGNAFSVRVGPVNTQELHQLSIKLSQNSNLALINHHSS
CCHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHEEEEEEEECCCCEEEEECCCC
PKQALNIKSKPQIPVKETSRPPSTHSVAKEMVDKKGSWYVAAKIGGQETTPDDQFTVNND
CHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECC
SGFASPFDKDIYTNSSDSSLVLGIGGGYRFTNMILPAISVGIYYSHFFNMDINGQVIQYS
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEE
LPEFTNYNYQWKVKSDLVLASVKANIFRWKNLMPFVQGGVGASSNRASQYYENALPDVTP
CCCCCCCCEEEEECCCEEEEEHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCCCCC
RISPNFANHTTTVIAYQLGAGLDWEIKPQWLLSLGYEYSDLGKVRSGYGTDSWGRETLSS
CCCCCCCCCCEEEEEEEECCCCCEEECHHHHEECCCCHHHHHHHHCCCCCCCCCHHHHCC
KNLTSNAGTLGFTYLFHG
CCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MFRINLIRYVALLFIITLNLDCISVAFSSQVIYGTQNAARVTGKSLKRIYFLQLGAFSQK
CEEEHHHHHHHHHHHHHCCCHHEEEEECCEEEEECCCHHHHHHHHHHEEEEEEECCCCCC
SNAQQLARKVQARTQYPVIISHSGNAFSVRVGPVNTQELHQLSIKLSQNSNLALINHHSS
CCHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHEEEEEEEECCCCEEEEECCCC
PKQALNIKSKPQIPVKETSRPPSTHSVAKEMVDKKGSWYVAAKIGGQETTPDDQFTVNND
CHHHCCCCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECC
SGFASPFDKDIYTNSSDSSLVLGIGGGYRFTNMILPAISVGIYYSHFFNMDINGQVIQYS
CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEE
LPEFTNYNYQWKVKSDLVLASVKANIFRWKNLMPFVQGGVGASSNRASQYYENALPDVTP
CCCCCCCCEEEEECCCEEEEEHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHCCCCCCC
RISPNFANHTTTVIAYQLGAGLDWEIKPQWLLSLGYEYSDLGKVRSGYGTDSWGRETLSS
CCCCCCCCCCEEEEEEEECCCCCEEECHHHHEECCCCHHHHHHHHCCCCCCCCCHHHHCC
KNLTSNAGTLGFTYLFHG
CCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA