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The map label for this gene is ydiS [C]

Identifier: 54294175

GI number: 54294175

Start: 1381773

End: 1383404

Strand: Reverse

Name: ydiS [C]

Synonym: lpl1239

Alternate gene names: 54294175

Gene position: 1383404-1381773 (Counterclockwise)

Preceding gene: 54294179

Following gene: 54294174

Centisome position: 41.35

GC content: 40.69

Gene sequence:

>1632_bases
GTGGAACACGAAACGATGGAATTTGATGTTATCATAGTCGGTGCAGGGCCTTCTGGATTATCCGCTGCAATCAAATTAAA
GCAACTGGCTTTAGCTTCACAAAAAGAAATTACTATTTGTATACTGGAAAAAGGAGCTCAGGTCGGCGCTCATATTCTTT
CTGGTGCAGTTTTAGAACCCAGAAGCTTAAAAGAATTACTGCCAGAGAATTGGCAACAGGCTCCGCTAGATACTCCCGTT
AACAAAGATCTGTTTTATTTTTTGACTCAAAATAAATCATTTAAGCTCCCTACTCCAAAACCTATGCATAATGAAGGAAA
TTTTATTATCAGTTTGGGAGAACTATGTAAGTTTCTTGCAGAACAAGCAGAAGCTCTGGGCTGTGAAATATACCCTGGAT
TTGCGGCAGCAGAAATTCTCTATAATGATAAAAATCAAGTCATAGGTGTAGCTACTGGGGACGTAGGAATTGATCGGCAA
GGAAAAAAAACTGATAATTATCAGCCTGGCATGCATTTATTAGCCAAACAAACTTTATTTGCTGAGGGATGTCGCGGGCA
ATTAAGTCAAACATTAATGAGTCGCTATCATTTAAGAGATCATTCGCAACCACAAACTTACGGTATAGGGATTAAAGAAA
TCTGGCAAGTTGATGCATCCCAGCATGAACCTGGAAAAGTCATCCATACTGTTGGTTGGCCTCTTGATCATGCGACTTAT
GGAGGCTCCTTTTTGTATCATCTTTCAGAGCAGAGAGTTGCCATAGGTTTTGTTGTAGGACTAGACTACAAGAACCCATG
GTTAAATCCTTTTGGAGAGTTTCAGAGATTTAAAACTCACCCCCTTATTAAATCTGTTCTAACAGGCGGTGAGCGAATTG
GTTATGGAGCCAGAGCACTTAATGAGGGAGGATGGCAATCTCTCCCTAAACTTACCTTTCCTGGCGGCGCCTTGATTGGA
GATGCTGCCGGTTTCCTAAATGTGCCTAAAATCAAAGGAATTCACACCGCAATGCAATCTGGAATGCTTGCTGCACAAGC
TTGCTTTGATGCGCTAAGTGAGGAAAAGAGTGGTCAATTTGAGCTAAGCTCTTACTCTGAAAAAATCAATCAATCCTGGC
TAAAGCAAGAGCTATATGCAGTGCGAAATATTCGACCGGGATTCAAATACGGTTTATTGCCCGGTCTAATTAATGCTGCC
TTGGAAACTTATGTAACTCGAGGGTATTCTCCATGGACTTTAAAAAATCATGCGGATCATAAATCGTTAATTCCAGCAGA
AAAAGCTAAAAAAATTAACTATCCCAAGCCCGATGGCGTGCTCACATTTGATAAACTCTCATCTGTATTTTTATCAAATA
CATTTCATGAAGAAAATCAACCCTGCCATCTCAAGTTAAAACAACCTAAGCTGGCCATTGAAGTGAACTTAAATCAATAC
GCCTCCCCAGAAAGCCGCTATTGCCCGGCAGCTGTTTATGAAATAATCGAGGATGTTGAAAAAGGGCCTCGATTACAAAT
TAATGCCCAGAACTGTATTCATTGTAAAACGTGCGATATTAAAGATCCACGTCAAAATATAGTTTGGCAAGCGCCTGAAG
GTGGGGGGGGACCGAATTACTCAGGAATGTAA

Upstream 100 bases:

>100_bases
ATAAAATTAGCCCTTCAAAAATTGAAAATATAAAATTTAATCTTGATCTTAAACCTTATAAAGGCGATCATTTTTTCATT
TGTAAGTTAGAGGAGTACGT

Downstream 100 bases:

>100_bases
CCAATCAAACTCAAATAATGTTTTTGGGTAGAGTCCTGTAATTATTAGCAGGGATGTTGATATAAAACATGAAAATAAGG
ATTATTACATGTACCAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MEHETMEFDVIIVGAGPSGLSAAIKLKQLALASQKEITICILEKGAQVGAHILSGAVLEPRSLKELLPENWQQAPLDTPV
NKDLFYFLTQNKSFKLPTPKPMHNEGNFIISLGELCKFLAEQAEALGCEIYPGFAAAEILYNDKNQVIGVATGDVGIDRQ
GKKTDNYQPGMHLLAKQTLFAEGCRGQLSQTLMSRYHLRDHSQPQTYGIGIKEIWQVDASQHEPGKVIHTVGWPLDHATY
GGSFLYHLSEQRVAIGFVVGLDYKNPWLNPFGEFQRFKTHPLIKSVLTGGERIGYGARALNEGGWQSLPKLTFPGGALIG
DAAGFLNVPKIKGIHTAMQSGMLAAQACFDALSEEKSGQFELSSYSEKINQSWLKQELYAVRNIRPGFKYGLLPGLINAA
LETYVTRGYSPWTLKNHADHKSLIPAEKAKKINYPKPDGVLTFDKLSSVFLSNTFHEENQPCHLKLKQPKLAIEVNLNQY
ASPESRYCPAAVYEIIEDVEKGPRLQINAQNCIHCKTCDIKDPRQNIVWQAPEGGGGPNYSGM

Sequences:

>Translated_543_residues
MEHETMEFDVIIVGAGPSGLSAAIKLKQLALASQKEITICILEKGAQVGAHILSGAVLEPRSLKELLPENWQQAPLDTPV
NKDLFYFLTQNKSFKLPTPKPMHNEGNFIISLGELCKFLAEQAEALGCEIYPGFAAAEILYNDKNQVIGVATGDVGIDRQ
GKKTDNYQPGMHLLAKQTLFAEGCRGQLSQTLMSRYHLRDHSQPQTYGIGIKEIWQVDASQHEPGKVIHTVGWPLDHATY
GGSFLYHLSEQRVAIGFVVGLDYKNPWLNPFGEFQRFKTHPLIKSVLTGGERIGYGARALNEGGWQSLPKLTFPGGALIG
DAAGFLNVPKIKGIHTAMQSGMLAAQACFDALSEEKSGQFELSSYSEKINQSWLKQELYAVRNIRPGFKYGLLPGLINAA
LETYVTRGYSPWTLKNHADHKSLIPAEKAKKINYPKPDGVLTFDKLSSVFLSNTFHEENQPCHLKLKQPKLAIEVNLNQY
ASPESRYCPAAVYEIIEDVEKGPRLQINAQNCIHCKTCDIKDPRQNIVWQAPEGGGGPNYSGM
>Mature_543_residues
MEHETMEFDVIIVGAGPSGLSAAIKLKQLALASQKEITICILEKGAQVGAHILSGAVLEPRSLKELLPENWQQAPLDTPV
NKDLFYFLTQNKSFKLPTPKPMHNEGNFIISLGELCKFLAEQAEALGCEIYPGFAAAEILYNDKNQVIGVATGDVGIDRQ
GKKTDNYQPGMHLLAKQTLFAEGCRGQLSQTLMSRYHLRDHSQPQTYGIGIKEIWQVDASQHEPGKVIHTVGWPLDHATY
GGSFLYHLSEQRVAIGFVVGLDYKNPWLNPFGEFQRFKTHPLIKSVLTGGERIGYGARALNEGGWQSLPKLTFPGGALIG
DAAGFLNVPKIKGIHTAMQSGMLAAQACFDALSEEKSGQFELSSYSEKINQSWLKQELYAVRNIRPGFKYGLLPGLINAA
LETYVTRGYSPWTLKNHADHKSLIPAEKAKKINYPKPDGVLTFDKLSSVFLSNTFHEENQPCHLKLKQPKLAIEVNLNQY
ASPESRYCPAAVYEIIEDVEKGPRLQINAQNCIHCKTCDIKDPRQNIVWQAPEGGGGPNYSGM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=560, Percent_Identity=54.8214285714286, Blast_Score=615, Evalue=1e-176,
Organism=Escherichia coli, GI1787991, Length=394, Percent_Identity=26.6497461928934, Blast_Score=116, Evalue=4e-27,
Organism=Escherichia coli, GI1786227, Length=384, Percent_Identity=25, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87082155, Length=379, Percent_Identity=25.5936675461741, Blast_Score=87, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25144720, Length=559, Percent_Identity=52.2361359570662, Blast_Score=585, Evalue=1e-167,
Organism=Saccharomyces cerevisiae, GI6324932, Length=567, Percent_Identity=45.679012345679, Blast_Score=509, Evalue=1e-145,
Organism=Drosophila melanogaster, GI24652256, Length=556, Percent_Identity=55.2158273381295, Blast_Score=618, Evalue=1e-177,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60031; Mature: 60031

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHETMEFDVIIVGAGPSGLSAAIKLKQLALASQKEITICILEKGAQVGAHILSGAVLEP
CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCC
RSLKELLPENWQQAPLDTPVNKDLFYFLTQNKSFKLPTPKPMHNEGNFIISLGELCKFLA
HHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCEEEEHHHHHHHHH
EQAEALGCEIYPGFAAAEILYNDKNQVIGVATGDVGIDRQGKKTDNYQPGMHLLAKQTLF
HHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
AEGCRGQLSQTLMSRYHLRDHSQPQTYGIGIKEIWQVDASQHEPGKVIHTVGWPLDHATY
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
GGSFLYHLSEQRVAIGFVVGLDYKNPWLNPFGEFQRFKTHPLIKSVLTGGERIGYGARAL
CCEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCHHHC
NEGGWQSLPKLTFPGGALIGDAAGFLNVPKIKGIHTAMQSGMLAAQACFDALSEEKSGQF
CCCCCCCCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCE
ELSSYSEKINQSWLKQELYAVRNIRPGFKYGLLPGLINAALETYVTRGYSPWTLKNHADH
EHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
KSLIPAEKAKKINYPKPDGVLTFDKLSSVFLSNTFHEENQPCHLKLKQPKLAIEVNLNQY
CCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCHHC
ASPESRYCPAAVYEIIEDVEKGPRLQINAQNCIHCKTCDIKDPRQNIVWQAPEGGGGPNY
CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCC
SGM
CCC
>Mature Secondary Structure
MEHETMEFDVIIVGAGPSGLSAAIKLKQLALASQKEITICILEKGAQVGAHILSGAVLEP
CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCC
RSLKELLPENWQQAPLDTPVNKDLFYFLTQNKSFKLPTPKPMHNEGNFIISLGELCKFLA
HHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCEEEEHHHHHHHHH
EQAEALGCEIYPGFAAAEILYNDKNQVIGVATGDVGIDRQGKKTDNYQPGMHLLAKQTLF
HHHHHCCCEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
AEGCRGQLSQTLMSRYHLRDHSQPQTYGIGIKEIWQVDASQHEPGKVIHTVGWPLDHATY
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
GGSFLYHLSEQRVAIGFVVGLDYKNPWLNPFGEFQRFKTHPLIKSVLTGGERIGYGARAL
CCEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCHHHC
NEGGWQSLPKLTFPGGALIGDAAGFLNVPKIKGIHTAMQSGMLAAQACFDALSEEKSGQF
CCCCCCCCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCE
ELSSYSEKINQSWLKQELYAVRNIRPGFKYGLLPGLINAALETYVTRGYSPWTLKNHADH
EHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
KSLIPAEKAKKINYPKPDGVLTFDKLSSVFLSNTFHEENQPCHLKLKQPKLAIEVNLNQY
CCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCHHC
ASPESRYCPAAVYEIIEDVEKGPRLQINAQNCIHCKTCDIKDPRQNIVWQAPEGGGGPNY
CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCC
SGM
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]