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The map label for this gene is 54294053

Identifier: 54294053

GI number: 54294053

Start: 1239963

End: 1240346

Strand: Reverse

Name: 54294053

Synonym: lpl1116

Alternate gene names: NA

Gene position: 1240346-1239963 (Counterclockwise)

Preceding gene: 54294054

Following gene: 54294052

Centisome position: 37.07

GC content: 30.47

Gene sequence:

>384_bases
ATGATATTAAGATTAATCCTTGCTTTTTATTTGATTATTTTCCCCCATAAATTTTTAATGGCTAATCAAGTTATGAATAC
TGCTATTAAGGTATTGGAGGAATGTTATGACAAAGCCACTGATCTTAGAAACTATGTTCCATGTGTTGAAACAAAAGCAG
AGAAAATACACACCTTACAAAATTTGCAAATACGCATAAAATTTAAAAATCCTGAAAAAAACTCTAAAGAAAAAGTACCC
ATATTGATGGTAGATAAAACAGGATACATGTATTATTGTATTGCAACAGCAGGAAAAAATTTAACCATAGATTCCTGCGC
TGGTACACATGGAAAACCTTTGTCTGAAGGACAATTGATGTCAATAGAGCTACTAAAAGATTAA

Upstream 100 bases:

>100_bases
CTATAAAACCTATGATTAGCAAACCAAGGTAAAATAACAAACATTTTACAAATGTTGCATTATAATTAACCTATACGGAG
TATCTTAGAGGTTAATTATA

Downstream 100 bases:

>100_bases
TATCTGTTATTCAATGTGCTTAATGCGATTGACATAGCTAAACTGTATAATCTCGCCTTAATAAACAGGTTTACAGAAAA
CTCGATTAATACTTATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MILRLILAFYLIIFPHKFLMANQVMNTAIKVLEECYDKATDLRNYVPCVETKAEKIHTLQNLQIRIKFKNPEKNSKEKVP
ILMVDKTGYMYYCIATAGKNLTIDSCAGTHGKPLSEGQLMSIELLKD

Sequences:

>Translated_127_residues
MILRLILAFYLIIFPHKFLMANQVMNTAIKVLEECYDKATDLRNYVPCVETKAEKIHTLQNLQIRIKFKNPEKNSKEKVP
ILMVDKTGYMYYCIATAGKNLTIDSCAGTHGKPLSEGQLMSIELLKD
>Mature_127_residues
MILRLILAFYLIIFPHKFLMANQVMNTAIKVLEECYDKATDLRNYVPCVETKAEKIHTLQNLQIRIKFKNPEKNSKEKVP
ILMVDKTGYMYYCIATAGKNLTIDSCAGTHGKPLSEGQLMSIELLKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14526; Mature: 14526

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRLILAFYLIIFPHKFLMANQVMNTAIKVLEECYDKATDLRNYVPCVETKAEKIHTLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
NLQIRIKFKNPEKNSKEKVPILMVDKTGYMYYCIATAGKNLTIDSCAGTHGKPLSEGQLM
CEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCEE
SIELLKD
EEEEECC
>Mature Secondary Structure
MILRLILAFYLIIFPHKFLMANQVMNTAIKVLEECYDKATDLRNYVPCVETKAEKIHTLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
NLQIRIKFKNPEKNSKEKVPILMVDKTGYMYYCIATAGKNLTIDSCAGTHGKPLSEGQLM
CEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCEE
SIELLKD
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA