Click here to switch to the map view.

The map label for this gene is 54294049

Identifier: 54294049

GI number: 54294049

Start: 1236632

End: 1237699

Strand: Reverse

Name: 54294049

Synonym: lpl1112

Alternate gene names: NA

Gene position: 1237699-1236632 (Counterclockwise)

Preceding gene: 54294050

Following gene: 54294046

Centisome position: 36.99

GC content: 32.87

Gene sequence:

>1068_bases
ATGAAATTTTTTTTAAAACAATCTCACCAGCATTCCTCTAATCAAAAAAAAAGAAACCAGCCTCCTCAATCTGAAGACTA
CTATTTAATAATTCGTCAAGCTCAATTTGGCACTATCACTATTGACTTTGTTGGCAGCATAAGGCTTATATTCACCTTTT
CGATATTTTGTTTTAGAGCAATTTTTGGTTTGCTTACTGGCCTTGTTTCTAAAAAAGAGCTTTTTGATTTTGTATTTAAT
AGAACAAAAATTGGCCTTAAAAGTTCGACTGATACCATTACAGTGAGAAGAAGAGCAACAAACGAAACTGAGAAGATACA
AGAAACAACGCCAAAAAAATCATTATTAGAAAAAGAGACAGAAGAACCATATACTTCGACCAACACTAAGCCAACTATCA
AGCCCAATATTACTCATACGCAGAATGCTTTTTTCACAAAATCTGAAGAGAAATCAAAAACAAAATCATTTAAAACGGTC
GAATTTCATGATTTCAACAATTCTGAAGTGCTTATGGATTTTATGGAAAAAATAAATATTCTCATAGCACAAGACGAGGC
AATGGCTATCCCGATAAAAGAGGATGAGAACTTGTCTTCGGCAGGGGAAGAGCATATTGTAAAATTAATTGAGATAATGA
AAAATTCTGAGTTACTAAAACATGAGTTTTGGAATAAGCTGAACCAGATGGTTCTTAAAGACATTCAATTATTTGTCAGT
AAACTTAGTCCAGCTAAAGAAAAAGGGAAGTTTGGCTCAAGTGACCTGGATTATTTATGGCGTTATTTTAATGGTTTTGA
ATTTGAACCTTCAAAAAGAGAAAATAGAAAAGATAAGTTTGCAGTGATGCTTGAAGCCCTTTCAGAAGAACAGTTAAAGG
CTTCTTTTGATTCGCCTGATTTTTTAAGCCTTTTAAATAAAGACTACTACATTGAGGCTGCAGCTAACACATTAAAACGT
AAACAATTGGCATTGTTTGCTACAAATATCAACAGGCATGACATTCTGAATTTAATGATAAAAAAACTAAAACTGACGTG
GTCAAGCAAATTTGTACACCCCAGTTAA

Upstream 100 bases:

>100_bases
ACGAATTCAACTCTATTAACGAATTCTCAGGATGATTTGGTTAATAAAATAAACCATTATTCTTACATTACATTTAACCA
TATGGATATTAGTTAATATA

Downstream 100 bases:

>100_bases
GCCACTTTTTTCATTAACCCCCAGTACCGATTTTCAAATTGATTCGGACTTAGATAATCCAAAGACGAATGCAATCTTTG
ATTGTTATAAAACATAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKFFLKQSHQHSSNQKKRNQPPQSEDYYLIIRQAQFGTITIDFVGSIRLIFTFSIFCFRAIFGLLTGLVSKKELFDFVFN
RTKIGLKSSTDTITVRRRATNETEKIQETTPKKSLLEKETEEPYTSTNTKPTIKPNITHTQNAFFTKSEEKSKTKSFKTV
EFHDFNNSEVLMDFMEKINILIAQDEAMAIPIKEDENLSSAGEEHIVKLIEIMKNSELLKHEFWNKLNQMVLKDIQLFVS
KLSPAKEKGKFGSSDLDYLWRYFNGFEFEPSKRENRKDKFAVMLEALSEEQLKASFDSPDFLSLLNKDYYIEAAANTLKR
KQLALFATNINRHDILNLMIKKLKLTWSSKFVHPS

Sequences:

>Translated_355_residues
MKFFLKQSHQHSSNQKKRNQPPQSEDYYLIIRQAQFGTITIDFVGSIRLIFTFSIFCFRAIFGLLTGLVSKKELFDFVFN
RTKIGLKSSTDTITVRRRATNETEKIQETTPKKSLLEKETEEPYTSTNTKPTIKPNITHTQNAFFTKSEEKSKTKSFKTV
EFHDFNNSEVLMDFMEKINILIAQDEAMAIPIKEDENLSSAGEEHIVKLIEIMKNSELLKHEFWNKLNQMVLKDIQLFVS
KLSPAKEKGKFGSSDLDYLWRYFNGFEFEPSKRENRKDKFAVMLEALSEEQLKASFDSPDFLSLLNKDYYIEAAANTLKR
KQLALFATNINRHDILNLMIKKLKLTWSSKFVHPS
>Mature_355_residues
MKFFLKQSHQHSSNQKKRNQPPQSEDYYLIIRQAQFGTITIDFVGSIRLIFTFSIFCFRAIFGLLTGLVSKKELFDFVFN
RTKIGLKSSTDTITVRRRATNETEKIQETTPKKSLLEKETEEPYTSTNTKPTIKPNITHTQNAFFTKSEEKSKTKSFKTV
EFHDFNNSEVLMDFMEKINILIAQDEAMAIPIKEDENLSSAGEEHIVKLIEIMKNSELLKHEFWNKLNQMVLKDIQLFVS
KLSPAKEKGKFGSSDLDYLWRYFNGFEFEPSKRENRKDKFAVMLEALSEEQLKASFDSPDFLSLLNKDYYIEAAANTLKR
KQLALFATNINRHDILNLMIKKLKLTWSSKFVHPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41351; Mature: 41351

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFLKQSHQHSSNQKKRNQPPQSEDYYLIIRQAQFGTITIDFVGSIRLIFTFSIFCFRA
CCCHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHH
IFGLLTGLVSKKELFDFVFNRTKIGLKSSTDTITVRRRATNETEKIQETTPKKSLLEKET
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHC
EEPYTSTNTKPTIKPNITHTQNAFFTKSEEKSKTKSFKTVEFHDFNNSEVLMDFMEKINI
CCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCE
LIAQDEAMAIPIKEDENLSSAGEEHIVKLIEIMKNSELLKHEFWNKLNQMVLKDIQLFVS
EEECCCEEEECCCCCCCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KLSPAKEKGKFGSSDLDYLWRYFNGFEFEPSKRENRKDKFAVMLEALSEEQLKASFDSPD
HCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCH
FLSLLNKDYYIEAAANTLKRKQLALFATNINRHDILNLMIKKLKLTWSSKFVHPS
HHHHHCCCCEEEHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKFFLKQSHQHSSNQKKRNQPPQSEDYYLIIRQAQFGTITIDFVGSIRLIFTFSIFCFRA
CCCHHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHH
IFGLLTGLVSKKELFDFVFNRTKIGLKSSTDTITVRRRATNETEKIQETTPKKSLLEKET
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHC
EEPYTSTNTKPTIKPNITHTQNAFFTKSEEKSKTKSFKTVEFHDFNNSEVLMDFMEKINI
CCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCE
LIAQDEAMAIPIKEDENLSSAGEEHIVKLIEIMKNSELLKHEFWNKLNQMVLKDIQLFVS
EEECCCEEEECCCCCCCCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KLSPAKEKGKFGSSDLDYLWRYFNGFEFEPSKRENRKDKFAVMLEALSEEQLKASFDSPD
HCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCH
FLSLLNKDYYIEAAANTLKRKQLALFATNINRHDILNLMIKKLKLTWSSKFVHPS
HHHHHCCCCEEEHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA