Click here to switch to the map view.

The map label for this gene is 54294046

Identifier: 54294046

GI number: 54294046

Start: 1234367

End: 1235359

Strand: Reverse

Name: 54294046

Synonym: lpl1109

Alternate gene names: NA

Gene position: 1235359-1234367 (Counterclockwise)

Preceding gene: 54294049

Following gene: 54294045

Centisome position: 36.92

GC content: 34.74

Gene sequence:

>993_bases
ATGCCTTATGCCACTACAAAAATTAAAATAGCCCTTATCGATCAGATTGCCCATTTACCTCATTCCGCTTCTTTCAAGAT
TGAACTCGCGAAATTGGCTGAACATTATATTAGTATGAATACCCAGGCACGTATAAAACGTTACCAGTCCCTACCCGCTC
TGTCATCCAATACAATCCACACTAAACCTCCTCTCTCAAAATGGTCTTCTGTAACTGCTATCTCCAAACCAACATATCCC
AATATATCTGTAGCAAAAGAAGAGTGGACTGATAATGCCTTTGAAGCATTCCTTAGTGAACTGAATGCTACAACGTACAT
TATCAATGAGAAAAAGATCATTGAAGATTTAAATAGTTTGCCAGATCATAGAATTAAAATGATAGCAGAAAGAGCTTCTT
TACCTAATTATGAGGATATGCTAAAACACTTTTGGATGATTGAATCCAAGACAATAAATCATAGATCTTTCATAGAGAAC
AGAAAAAATCGCCTGAAAATTATTCTAGAAAATTTATCGGAATCTCAATTAAAAAATTCCATAGAAGACAACAAGTTTTG
GGACATTTTTAGAAACACTCAAGAGCCTTATTGTAAAATGGCTGCCAAAGCATTATCCCCAAAACAATTTGAAATAATCA
TTTCTAATGCCACACTCGAAAGGCATTCTGATTTTGCAGTAATCATTTCTCAAATTAAAAAAGACAGCAGCGCTGACAAA
GAAAGACTGCAAAAAATTATAGAAGCAATCATTCCCCATACTACTCCATGGTTTGCTTTAGCTTTAGAACGCCAAATAAA
AGGTTTATTGACAAGTGATAAATCCTTGTTCGAGAAATTTAGCACTGATTTAAAAAAATACCTCAGTAAATCGCTGGAAA
GACCCGAAGTTAGTTTAAAATACAGAAGAGACAGAGATCTAAATCGACATGCTATTTCTCATCTCCTGACAGAACCACTT
GAAAACTCTTACAAAGCGTCCTTTAGTCTTTAA

Upstream 100 bases:

>100_bases
GTGACCTCCAATTAAACAAATTATCTCTTAACTGGAGTGTCTAAATCAATTGAACCACATCAAACCAAGCACTTATTTGT
TAGGCAAACTTGCTTCTGTT

Downstream 100 bases:

>100_bases
AGATACTCTACTACTACCTTAAGAGCTCTCTGCTTTTGACCAGTAAGGCACCAATTACAAAAAACCAATAGAGACGTTAA
GCAAATCGCAATTCATTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MPYATTKIKIALIDQIAHLPHSASFKIELAKLAEHYISMNTQARIKRYQSLPALSSNTIHTKPPLSKWSSVTAISKPTYP
NISVAKEEWTDNAFEAFLSELNATTYIINEKKIIEDLNSLPDHRIKMIAERASLPNYEDMLKHFWMIESKTINHRSFIEN
RKNRLKIILENLSESQLKNSIEDNKFWDIFRNTQEPYCKMAAKALSPKQFEIIISNATLERHSDFAVIISQIKKDSSADK
ERLQKIIEAIIPHTTPWFALALERQIKGLLTSDKSLFEKFSTDLKKYLSKSLERPEVSLKYRRDRDLNRHAISHLLTEPL
ENSYKASFSL

Sequences:

>Translated_330_residues
MPYATTKIKIALIDQIAHLPHSASFKIELAKLAEHYISMNTQARIKRYQSLPALSSNTIHTKPPLSKWSSVTAISKPTYP
NISVAKEEWTDNAFEAFLSELNATTYIINEKKIIEDLNSLPDHRIKMIAERASLPNYEDMLKHFWMIESKTINHRSFIEN
RKNRLKIILENLSESQLKNSIEDNKFWDIFRNTQEPYCKMAAKALSPKQFEIIISNATLERHSDFAVIISQIKKDSSADK
ERLQKIIEAIIPHTTPWFALALERQIKGLLTSDKSLFEKFSTDLKKYLSKSLERPEVSLKYRRDRDLNRHAISHLLTEPL
ENSYKASFSL
>Mature_329_residues
PYATTKIKIALIDQIAHLPHSASFKIELAKLAEHYISMNTQARIKRYQSLPALSSNTIHTKPPLSKWSSVTAISKPTYPN
ISVAKEEWTDNAFEAFLSELNATTYIINEKKIIEDLNSLPDHRIKMIAERASLPNYEDMLKHFWMIESKTINHRSFIENR
KNRLKIILENLSESQLKNSIEDNKFWDIFRNTQEPYCKMAAKALSPKQFEIIISNATLERHSDFAVIISQIKKDSSADKE
RLQKIIEAIIPHTTPWFALALERQIKGLLTSDKSLFEKFSTDLKKYLSKSLERPEVSLKYRRDRDLNRHAISHLLTEPLE
NSYKASFSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38231; Mature: 38100

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYATTKIKIALIDQIAHLPHSASFKIELAKLAEHYISMNTQARIKRYQSLPALSSNTIH
CCCCCCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
TKPPLSKWSSVTAISKPTYPNISVAKEEWTDNAFEAFLSELNATTYIINEKKIIEDLNSL
CCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEECHHHHHHHHHCC
PDHRIKMIAERASLPNYEDMLKHFWMIESKTINHRSFIENRKNRLKIILENLSESQLKNS
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEDNKFWDIFRNTQEPYCKMAAKALSPKQFEIIISNATLERHSDFAVIISQIKKDSSADK
CCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCHHH
ERLQKIIEAIIPHTTPWFALALERQIKGLLTSDKSLFEKFSTDLKKYLSKSLERPEVSLK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
YRRDRDLNRHAISHLLTEPLENSYKASFSL
ECCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PYATTKIKIALIDQIAHLPHSASFKIELAKLAEHYISMNTQARIKRYQSLPALSSNTIH
CCCCCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
TKPPLSKWSSVTAISKPTYPNISVAKEEWTDNAFEAFLSELNATTYIINEKKIIEDLNSL
CCCCCHHHCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCEEEEECHHHHHHHHHCC
PDHRIKMIAERASLPNYEDMLKHFWMIESKTINHRSFIENRKNRLKIILENLSESQLKNS
CHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEDNKFWDIFRNTQEPYCKMAAKALSPKQFEIIISNATLERHSDFAVIISQIKKDSSADK
CCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHCCHHHHHHHHHHCCCCHHH
ERLQKIIEAIIPHTTPWFALALERQIKGLLTSDKSLFEKFSTDLKKYLSKSLERPEVSLK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
YRRDRDLNRHAISHLLTEPLENSYKASFSL
ECCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA