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The map label for this gene is 54294030

Identifier: 54294030

GI number: 54294030

Start: 1218451

End: 1218768

Strand: Reverse

Name: 54294030

Synonym: lpl1091

Alternate gene names: NA

Gene position: 1218768-1218451 (Counterclockwise)

Preceding gene: 54294039

Following gene: 54294027

Centisome position: 36.43

GC content: 31.45

Gene sequence:

>318_bases
ATGAATTTACAAACAATTAAATCTCTTGATGGCAAAATCGAATATGTTTTATTGCCTGTAGCCACTTATAATGTATTACG
TCAACAAAGTAATGAGCAACTAAAACATACCCAAGAAGATTATGAGATCTTTAATCCTGCTGATTACGTTGATAACCCAG
TAGCATTGGCTCGTATTCAAACAGGATTAACTCAAGAAGAATTAGCTAAGAAAATGGAAGTTACACAAGCTTTTATTAGT
AAAATTGAGAATCAAGAAAAAGTTACGCCTAAAATGTTAACTAAAGTTAAACAGGCTTTATCCAATCGTCAGGATTAA

Upstream 100 bases:

>100_bases
ATTCCGTATTACAGCTCGCCAACGAGCTTGCTGGGTAAAGATTCAAATGATCCAATCTTCGATATAAAGAAATTAAAAGG
CGACTCTTATTTTCGACAGA

Downstream 100 bases:

>100_bases
TGAACCAATAATCCCGTATCGACAGACTAATGCCGAGAACTCTTTTAGGCTATGGGTGGACAAAGCAAAGCGGGTCTACC
AAAAGACTTGATTTCGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MNLQTIKSLDGKIEYVLLPVATYNVLRQQSNEQLKHTQEDYEIFNPADYVDNPVALARIQTGLTQEELAKKMEVTQAFIS
KIENQEKVTPKMLTKVKQALSNRQD

Sequences:

>Translated_105_residues
MNLQTIKSLDGKIEYVLLPVATYNVLRQQSNEQLKHTQEDYEIFNPADYVDNPVALARIQTGLTQEELAKKMEVTQAFIS
KIENQEKVTPKMLTKVKQALSNRQD
>Mature_105_residues
MNLQTIKSLDGKIEYVLLPVATYNVLRQQSNEQLKHTQEDYEIFNPADYVDNPVALARIQTGLTQEELAKKMEVTQAFIS
KIENQEKVTPKMLTKVKQALSNRQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12066; Mature: 12066

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQTIKSLDGKIEYVLLPVATYNVLRQQSNEQLKHTQEDYEIFNPADYVDNPVALARIQ
CCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH
TGLTQEELAKKMEVTQAFISKIENQEKVTPKMLTKVKQALSNRQD
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLQTIKSLDGKIEYVLLPVATYNVLRQQSNEQLKHTQEDYEIFNPADYVDNPVALARIQ
CCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHH
TGLTQEELAKKMEVTQAFISKIENQEKVTPKMLTKVKQALSNRQD
HCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA