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The map label for this gene is rmuC [H]

Identifier: 54294026

GI number: 54294026

Start: 1214933

End: 1216825

Strand: Reverse

Name: rmuC [H]

Synonym: lpl1087

Alternate gene names: 54294026

Gene position: 1216825-1214933 (Counterclockwise)

Preceding gene: 54294027

Following gene: 54294025

Centisome position: 36.37

GC content: 39.99

Gene sequence:

>1893_bases
ATGCAAGACATTCAATGGACAACTGAGTTGATCAGCATTGCTATCATCATTGGTATCACCTTAACGACTATCGGCTTTTT
GTTAGCGATGGTACTCCAAGGTCGAAAACTAACGTATATCACTACGCAATTGGAGCATAGCCAGAAAACAATTGAACAGA
CAAACAATACTAATACTGAAATACAGGCACAGCTGAAAAATACACAGTCCACCCTACATCAGAAAGAGTTATTAGAAAGC
AAGTTACAAGAACAGTTCAGTAATGCAAAAGCTAATGAACAGCGATTAGCAAGCGAACTAGCGATGCTCAAAGACGAGCT
AACCGATCTTGGGTCAAAATTAGAACATATGAACCAACAAATGCACATATCTGAAAAGAAGTATGAAGCAGCTCAAGCAG
AGAACCGAGCCCTACAAAAACAAGCAAGTGATCTAGACCAACGATTAACCCAAACAAATCAAGCCTTGGAAAAAGAACGC
AACCTAGTAAGTGAGCTCAAAGACTATTTGTCTCAAGAAGGTAAAAAAACCAAATCTCTTGAAGTATCTGAGAAAGAAGC
TCGTGAACAGCTTAACGAGATAAAGTTGAAAATGTCCGAGCAAATAACTGACTATAGGCAATTACAAGAGCGCAACCAAA
GCCTGAGCAACGAATACACTGAATTAAAGACCACATTAGAACGTAAAGAAGAGCATTTTAAAGAACAAATGCAGCAACTT
AATGAGGCCAAACTAGCGCTTACAAGAGAGTTCGAAAACCTAGCCAATAAAATCTTTGAGGAAAAGGGAAAGGCTTTCAC
CCACAACAGTCAGGTTAGCATCGATAATATACTTAAGCCATTTCGAGAGCAGATTGAAGGTTTCCAGAAACGTATTAATG
AAGTGCATGATGCTTCAATTCAAGGTAACACTAGTCTAAGCTTCGAAATCAAAAAGGTATTAGATATTGGCTTGCAAATG
AGCAAAGAGGCAAATAATTTAACTTCCGCATTAAAAGGAAACTCACAACAACGAGGCGCTTGGGGTGAAGCCCAACTCCG
ACGCACCCTCGAAATGAGTGGTCTAATAGAAAATACACATTATGAAGTACAAAGCTCATTTAAAGATTCAGAAGGTAAAC
AAAAGCAGACTGACTACCTAATTAAATTACCCGATGGAAAACACATCATTATTGACAGTAAGGTGACTTTGAATGCCTAC
GATAGAGCAGTGGCTGCTGAATCACCAGAGGAATATCAATTAGCTATGAATGAGCATGTTAAGGCAGTGCGCAAACACAT
TGATGATTTGACCTCCAAAGACTATACCAATCTGATCGGCATGCGCAGCCCTAGTTTTGTACTAATGTTCATGCCCATGG
AACCAGCATATATTGAGGCGCTTAAAAGCAACAAAGACCTGTTCGAGTATGGCTACAATAAAGGCATAGTATTAGTCTCC
CACACTACCTTGATCCCTATTTTACGAACTGTATCTAACTTGTGGATGATCGAACGCAGCAATGCTGAGGCTCGCGAAAT
AAGCGAAAAAGCTGGAGAAATTTATAATCAAGTGTGCATCGTTGCCGAACGTTTAAGTAAACTTGGTAGCACACTCAGTA
TTGCCAGTAACCATTACAATAACACCGTTAAGGCCCTGGTAGGGCAACAAGGACTGTATGGAAAGGTGGATCGCTTCAGT
CAACTGTCTGCGAAAGTTAGCAAGAGCATGCCACAATTGGAACCTTCTCATATGGACTTCGAAACCGAACGCTTATCGCT
CATTATTGAACCCATAGATGAAGAACAAGTACAATCTGCATCTCTAAAAATTGAAAATAAGTCGGACACTACCTCAGTAA
CAGCTCCCACAGATGATCCAAACATTGGAAGAAAATCAAAGACCGAAAATTAG

Upstream 100 bases:

>100_bases
TTGTTTATTGTCCACTAGCTTTGAAGAAATATAGAGTAGCCCGTTTGCTTAAATTACTTTTAAAAGATTGGATTTCAGCA
TACTAAATACAGGAGTAAAT

Downstream 100 bases:

>100_bases
GGGCTCTATCCCAGTAAAGGAGTAAGCAGTCCTCATTAAGTTAATAGGCTCTACCCCAACAAAGGGGGCACTTTAATCAA
GTTAGTATAAACTAACCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 630; Mature: 630

Protein sequence:

>630_residues
MQDIQWTTELISIAIIIGITLTTIGFLLAMVLQGRKLTYITTQLEHSQKTIEQTNNTNTEIQAQLKNTQSTLHQKELLES
KLQEQFSNAKANEQRLASELAMLKDELTDLGSKLEHMNQQMHISEKKYEAAQAENRALQKQASDLDQRLTQTNQALEKER
NLVSELKDYLSQEGKKTKSLEVSEKEAREQLNEIKLKMSEQITDYRQLQERNQSLSNEYTELKTTLERKEEHFKEQMQQL
NEAKLALTREFENLANKIFEEKGKAFTHNSQVSIDNILKPFREQIEGFQKRINEVHDASIQGNTSLSFEIKKVLDIGLQM
SKEANNLTSALKGNSQQRGAWGEAQLRRTLEMSGLIENTHYEVQSSFKDSEGKQKQTDYLIKLPDGKHIIIDSKVTLNAY
DRAVAAESPEEYQLAMNEHVKAVRKHIDDLTSKDYTNLIGMRSPSFVLMFMPMEPAYIEALKSNKDLFEYGYNKGIVLVS
HTTLIPILRTVSNLWMIERSNAEAREISEKAGEIYNQVCIVAERLSKLGSTLSIASNHYNNTVKALVGQQGLYGKVDRFS
QLSAKVSKSMPQLEPSHMDFETERLSLIIEPIDEEQVQSASLKIENKSDTTSVTAPTDDPNIGRKSKTEN

Sequences:

>Translated_630_residues
MQDIQWTTELISIAIIIGITLTTIGFLLAMVLQGRKLTYITTQLEHSQKTIEQTNNTNTEIQAQLKNTQSTLHQKELLES
KLQEQFSNAKANEQRLASELAMLKDELTDLGSKLEHMNQQMHISEKKYEAAQAENRALQKQASDLDQRLTQTNQALEKER
NLVSELKDYLSQEGKKTKSLEVSEKEAREQLNEIKLKMSEQITDYRQLQERNQSLSNEYTELKTTLERKEEHFKEQMQQL
NEAKLALTREFENLANKIFEEKGKAFTHNSQVSIDNILKPFREQIEGFQKRINEVHDASIQGNTSLSFEIKKVLDIGLQM
SKEANNLTSALKGNSQQRGAWGEAQLRRTLEMSGLIENTHYEVQSSFKDSEGKQKQTDYLIKLPDGKHIIIDSKVTLNAY
DRAVAAESPEEYQLAMNEHVKAVRKHIDDLTSKDYTNLIGMRSPSFVLMFMPMEPAYIEALKSNKDLFEYGYNKGIVLVS
HTTLIPILRTVSNLWMIERSNAEAREISEKAGEIYNQVCIVAERLSKLGSTLSIASNHYNNTVKALVGQQGLYGKVDRFS
QLSAKVSKSMPQLEPSHMDFETERLSLIIEPIDEEQVQSASLKIENKSDTTSVTAPTDDPNIGRKSKTEN
>Mature_630_residues
MQDIQWTTELISIAIIIGITLTTIGFLLAMVLQGRKLTYITTQLEHSQKTIEQTNNTNTEIQAQLKNTQSTLHQKELLES
KLQEQFSNAKANEQRLASELAMLKDELTDLGSKLEHMNQQMHISEKKYEAAQAENRALQKQASDLDQRLTQTNQALEKER
NLVSELKDYLSQEGKKTKSLEVSEKEAREQLNEIKLKMSEQITDYRQLQERNQSLSNEYTELKTTLERKEEHFKEQMQQL
NEAKLALTREFENLANKIFEEKGKAFTHNSQVSIDNILKPFREQIEGFQKRINEVHDASIQGNTSLSFEIKKVLDIGLQM
SKEANNLTSALKGNSQQRGAWGEAQLRRTLEMSGLIENTHYEVQSSFKDSEGKQKQTDYLIKLPDGKHIIIDSKVTLNAY
DRAVAAESPEEYQLAMNEHVKAVRKHIDDLTSKDYTNLIGMRSPSFVLMFMPMEPAYIEALKSNKDLFEYGYNKGIVLVS
HTTLIPILRTVSNLWMIERSNAEAREISEKAGEIYNQVCIVAERLSKLGSTLSIASNHYNNTVKALVGQQGLYGKVDRFS
QLSAKVSKSMPQLEPSHMDFETERLSLIIEPIDEEQVQSASLKIENKSDTTSVTAPTDDPNIGRKSKTEN

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=370, Percent_Identity=35.4054054054054, Blast_Score=253, Evalue=3e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 71799; Mature: 71799

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDIQWTTELISIAIIIGITLTTIGFLLAMVLQGRKLTYITTQLEHSQKTIEQTNNTNTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCH
IQAQLKNTQSTLHQKELLESKLQEQFSNAKANEQRLASELAMLKDELTDLGSKLEHMNQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHISEKKYEAAQAENRALQKQASDLDQRLTQTNQALEKERNLVSELKDYLSQEGKKTKSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EVSEKEAREQLNEIKLKMSEQITDYRQLQERNQSLSNEYTELKTTLERKEEHFKEQMQQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEAKLALTREFENLANKIFEEKGKAFTHNSQVSIDNILKPFREQIEGFQKRINEVHDASI
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
QGNTSLSFEIKKVLDIGLQMSKEANNLTSALKGNSQQRGAWGEAQLRRTLEMSGLIENTH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YEVQSSFKDSEGKQKQTDYLIKLPDGKHIIIDSKVTLNAYDRAVAAESPEEYQLAMNEHV
HHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCEEECHHHHHHHCCCCHHHHHHHHHHH
KAVRKHIDDLTSKDYTNLIGMRSPSFVLMFMPMEPAYIEALKSNKDLFEYGYNKGIVLVS
HHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHCCCCCEEEEE
HTTLIPILRTVSNLWMIERSNAEAREISEKAGEIYNQVCIVAERLSKLGSTLSIASNHYN
HHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
NTVKALVGQQGLYGKVDRFSQLSAKVSKSMPQLEPSHMDFETERLSLIIEPIDEEQVQSA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEECCCCHHHHHHH
SLKIENKSDTTSVTAPTDDPNIGRKSKTEN
HEEEECCCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDIQWTTELISIAIIIGITLTTIGFLLAMVLQGRKLTYITTQLEHSQKTIEQTNNTNTE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCH
IQAQLKNTQSTLHQKELLESKLQEQFSNAKANEQRLASELAMLKDELTDLGSKLEHMNQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHISEKKYEAAQAENRALQKQASDLDQRLTQTNQALEKERNLVSELKDYLSQEGKKTKSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EVSEKEAREQLNEIKLKMSEQITDYRQLQERNQSLSNEYTELKTTLERKEEHFKEQMQQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NEAKLALTREFENLANKIFEEKGKAFTHNSQVSIDNILKPFREQIEGFQKRINEVHDASI
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
QGNTSLSFEIKKVLDIGLQMSKEANNLTSALKGNSQQRGAWGEAQLRRTLEMSGLIENTH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YEVQSSFKDSEGKQKQTDYLIKLPDGKHIIIDSKVTLNAYDRAVAAESPEEYQLAMNEHV
HHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCEEECHHHHHHHCCCCHHHHHHHHHHH
KAVRKHIDDLTSKDYTNLIGMRSPSFVLMFMPMEPAYIEALKSNKDLFEYGYNKGIVLVS
HHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCHHHHHCCCCCEEEEE
HTTLIPILRTVSNLWMIERSNAEAREISEKAGEIYNQVCIVAERLSKLGSTLSIASNHYN
HHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
NTVKALVGQQGLYGKVDRFSQLSAKVSKSMPQLEPSHMDFETERLSLIIEPIDEEQVQSA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEECCCCHHHHHHH
SLKIENKSDTTSVTAPTDDPNIGRKSKTEN
HEEEECCCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]