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The map label for this gene is 54294009

Identifier: 54294009

GI number: 54294009

Start: 1200113

End: 1200817

Strand: Reverse

Name: 54294009

Synonym: lpl1070

Alternate gene names: NA

Gene position: 1200817-1200113 (Counterclockwise)

Preceding gene: 54294010

Following gene: 54294008

Centisome position: 35.89

GC content: 34.04

Gene sequence:

>705_bases
ATGCAGACACCAGAATCGCATGATGAAAGCTATTTCGCATCATTCACGGATATGCTTGTTGGAATTATTTTCATATTTAT
TATTTTGCTAATGATTGTGGCAAATAACTTTCAAAGTGCAACAAAAAAAGTGACTGAAATTAACGAATCAAGAGACAAAA
TTCTAAAAGAAATAGAACAATCTCTTAAACAAGAAGGTGTTTCAGTTACTATTGATATTGAGCAAGGAGTCCTTCGTTTA
CCAGAAAGTATTCTTTTTGGTGTTGACCAATATCAAGTTAATGAAGAAGGTAAAATAGCGCTTTCAAAGTTAGCATCTGT
TCTTGAAAAATACTTACCCTGTATGGCAGTAACTGAAGAAAAATTCAAATCTCAATGTGAATCTTTAAATCTGACTAGCC
GTGATGGGCTGGATGCAGTTTTCATTGAAGGTCATACTGATTCTACGGGTTCATCCGAACACAATTGGTATTTATCAGCT
AGAAGAGCCATTTCAGTTTTTAATGAGTTAATCGACGCCAAACCTTTACTTAATGTTGGTCTTAAAAATATTAATGGTAT
ACCCATATTAAATGTGAGCGGATATGAAGCAAGAAGACCAATTGATCCTAACAATTTAAGTGTGAACAGACGAATTGAAC
TTAGATTTATTATGCGATCCCCTACTCCGCAAGACATAAAGAGATTGAAACATGCCATTGGATAA

Upstream 100 bases:

>100_bases
AAAGCAATACGACAACTTAGCGGTGTTATTCAAGACCTTCAAGAAGAGCGAGAAAACGCTGAACTAACAACAAACAATTA
CCATAAAGCAGAGTATGTAG

Downstream 100 bases:

>100_bases
TCTTGCGAATACAAAAGAACAATTAAAACATTTTTTCAAACTTAACAAACTTAATGTTTCTAAGAATCTACTAACCTTGC
CTACGATTCTACATACAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; Chemotaxis Protein MotB-Related Protein; OmpA Family Protein; Chemotaxis Protein MotB-Like Protein; Flagellar Motor Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MQTPESHDESYFASFTDMLVGIIFIFIILLMIVANNFQSATKKVTEINESRDKILKEIEQSLKQEGVSVTIDIEQGVLRL
PESILFGVDQYQVNEEGKIALSKLASVLEKYLPCMAVTEEKFKSQCESLNLTSRDGLDAVFIEGHTDSTGSSEHNWYLSA
RRAISVFNELIDAKPLLNVGLKNINGIPILNVSGYEARRPIDPNNLSVNRRIELRFIMRSPTPQDIKRLKHAIG

Sequences:

>Translated_234_residues
MQTPESHDESYFASFTDMLVGIIFIFIILLMIVANNFQSATKKVTEINESRDKILKEIEQSLKQEGVSVTIDIEQGVLRL
PESILFGVDQYQVNEEGKIALSKLASVLEKYLPCMAVTEEKFKSQCESLNLTSRDGLDAVFIEGHTDSTGSSEHNWYLSA
RRAISVFNELIDAKPLLNVGLKNINGIPILNVSGYEARRPIDPNNLSVNRRIELRFIMRSPTPQDIKRLKHAIG
>Mature_234_residues
MQTPESHDESYFASFTDMLVGIIFIFIILLMIVANNFQSATKKVTEINESRDKILKEIEQSLKQEGVSVTIDIEQGVLRL
PESILFGVDQYQVNEEGKIALSKLASVLEKYLPCMAVTEEKFKSQCESLNLTSRDGLDAVFIEGHTDSTGSSEHNWYLSA
RRAISVFNELIDAKPLLNVGLKNINGIPILNVSGYEARRPIDPNNLSVNRRIELRFIMRSPTPQDIKRLKHAIG

Specific function: Unknown

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26341; Mature: 26341

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPESHDESYFASFTDMLVGIIFIFIILLMIVANNFQSATKKVTEINESRDKILKEIEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SLKQEGVSVTIDIEQGVLRLPESILFGVDQYQVNEEGKIALSKLASVLEKYLPCMAVTEE
HHHHCCCEEEEEECCCHHHCCHHHHHCCHHHEECCCCHHHHHHHHHHHHHHCCHHHHHHH
KFKSQCESLNLTSRDGLDAVFIEGHTDSTGSSEHNWYLSARRAISVFNELIDAKPLLNVG
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
LKNINGIPILNVSGYEARRPIDPNNLSVNRRIELRFIMRSPTPQDIKRLKHAIG
HCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQTPESHDESYFASFTDMLVGIIFIFIILLMIVANNFQSATKKVTEINESRDKILKEIEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SLKQEGVSVTIDIEQGVLRLPESILFGVDQYQVNEEGKIALSKLASVLEKYLPCMAVTEE
HHHHCCCEEEEEECCCHHHCCHHHHHCCHHHEECCCCHHHHHHHHHHHHHHCCHHHHHHH
KFKSQCESLNLTSRDGLDAVFIEGHTDSTGSSEHNWYLSARRAISVFNELIDAKPLLNVG
HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
LKNINGIPILNVSGYEARRPIDPNNLSVNRRIELRFIMRSPTPQDIKRLKHAIG
HCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA