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The map label for this gene is garP [C]

Identifier: 54293636

GI number: 54293636

Start: 768900

End: 770177

Strand: Direct

Name: garP [C]

Synonym: lpl0689

Alternate gene names: 54293636

Gene position: 768900-770177 (Clockwise)

Preceding gene: 54293635

Following gene: 54293641

Centisome position: 22.98

GC content: 41.31

Gene sequence:

>1278_bases
ATGCAAAAGCACCTAAATAATATGACTACTAAAAAACAAATTTCATATGGCGTCCTGGTTTGCTTTATCGGGGCTGTTTT
TTACTGTTATGAATTTATTCTCAGAATTGTTCCGGGAGCTTTACAAACAGAGCTAAGTACAGCTTTGGGACATATTTCTG
CTACCACCTTTGGGCAAATTTCAGCCCTGTATTATTTTGCATATTCACCCATGCAAATGCCTGTAGGGATGTTAATGGAC
CGCTATGGGCCGAGACGACTTTTGACTTTTGCCTGTTTGTGTTGTGCCTTGGGCTCGTGGATGTTTACTCTGACCTGGTC
AATTGTGCTTGTTGGAATTGGTCGATTCCTGGTGGGATTTGGCTCATCCTTCGCTTTTGTTGGTGTCTTATCTCTGGCTT
TGCATTGGCTGCCACGTCGTTATTTTTCTTTAGTGGCTGGTTTGATTACTACGCTAGGTATGCTAGGACTGGTTTATGGT
GAAATCAAAATAACTGAATGGTCAGAGGTCATAGGCTGGGATCATGTTTTAATGCACATTGCAATGATTGGTTCTGCGCT
GTGTATCTTAACTTTCTTTGTTGTTAGAGATGGTCCAGAAGGATATCAACCCAACAAATATCCTTGGCCCGAGTTTTTCC
ATAACGTGCTTAAGGTACTAACGTCCCATGAAGTATGGCTTATTGGGTTTGTTGGAGCCTGCCTTTATACTTCATTATCA
GTATTTGGAGAGCTGTGGGGTAAAACCTATTTGGAGCAAGCACATCATTTAACCAAAGTAGAAGCCGCAAAAACTGTTTC
TGCTGTTTTTCTGGGGTGGGCGGTAGGAGCTCCCTTGGCTGGGTACATATCCGATGTTACCCGCAGGCGATTGTTGCCTT
TGGTGATTGGTGCGATAGTTTCATTAATATGCATTAGTTTTGTTTTGTATTGCCCTGGCCTATCCTATCTTACCTTGAAC
ATATTGTTGTTCCTGTATGGCGTTTTCAGTGCAACTGAAATTATAGTTTTTATTATGGCTAAGGAATGTAGTGGTGCCAA
ATTATCAGGAACGGTTTTTGCAGTAACCAATATGATTATTTCTTTGGCTGGTGCTATTTTTCAACCGCTCGTGGGGAAGT
TACTGGATACCTTTGGCGATAGCGGTATAGTGGCAGGGGAACATATCTATACTGTTGATGACTATCAAGTGGCTCTTTCG
ATATTACCTATTTCATTACTTTTGGTAACTATTCTGGCTTTCTTTATTAAAGACAAGGACCACTCCAATAACTCCTAA

Upstream 100 bases:

>100_bases
AGTAAACTATATACCGTAGATGATTATCAGTTTGCCTTATCCATTATTCCATTAGGTATATTGATAGCAGCCATTTTAAC
TTTCTTTCTAAAAGAAACTC

Downstream 100 bases:

>100_bases
TCCTGGTAAAGAATCTTCCTTGTCTTTGTCAGGATGGACAGTTGAATACTGCGACTAGCTCTTTAACCGGTAGTCGCATC
TGACTTCTGCAGCTTATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Permease; Permease; Sugar Phosphate Permease; Transmembrane Transporter; Sugar Transporter; Transporter MFS Superfamily; Facilitator Family Transporter Transporter; Transporter Facilitator Family; Facilitator Superfamily Sugar Transporter; Facilitator Protein; MFS Family Transporter; Hexuronate Transporter; Facilitator Family Oxalate/Formate Antiporter; Sugar Transport Family Protein; Nitrate/Nitrite Transporter; Multidrug ABC Transporter; NasA Protein; Bicyclomycin Resistance Protein; MFS Transporter; Facilitator Membrane Proteins; Facilitator Family Hexuronate Transporter; Intraphagosomal Amino Acid Transporter Family Protein; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Transport Proteins; Facilitator Family Protein; Facilitator Superfamily Transporter Transporter

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MQKHLNNMTTKKQISYGVLVCFIGAVFYCYEFILRIVPGALQTELSTALGHISATTFGQISALYYFAYSPMQMPVGMLMD
RYGPRRLLTFACLCCALGSWMFTLTWSIVLVGIGRFLVGFGSSFAFVGVLSLALHWLPRRYFSLVAGLITTLGMLGLVYG
EIKITEWSEVIGWDHVLMHIAMIGSALCILTFFVVRDGPEGYQPNKYPWPEFFHNVLKVLTSHEVWLIGFVGACLYTSLS
VFGELWGKTYLEQAHHLTKVEAAKTVSAVFLGWAVGAPLAGYISDVTRRRLLPLVIGAIVSLICISFVLYCPGLSYLTLN
ILLFLYGVFSATEIIVFIMAKECSGAKLSGTVFAVTNMIISLAGAIFQPLVGKLLDTFGDSGIVAGEHIYTVDDYQVALS
ILPISLLLVTILAFFIKDKDHSNNS

Sequences:

>Translated_425_residues
MQKHLNNMTTKKQISYGVLVCFIGAVFYCYEFILRIVPGALQTELSTALGHISATTFGQISALYYFAYSPMQMPVGMLMD
RYGPRRLLTFACLCCALGSWMFTLTWSIVLVGIGRFLVGFGSSFAFVGVLSLALHWLPRRYFSLVAGLITTLGMLGLVYG
EIKITEWSEVIGWDHVLMHIAMIGSALCILTFFVVRDGPEGYQPNKYPWPEFFHNVLKVLTSHEVWLIGFVGACLYTSLS
VFGELWGKTYLEQAHHLTKVEAAKTVSAVFLGWAVGAPLAGYISDVTRRRLLPLVIGAIVSLICISFVLYCPGLSYLTLN
ILLFLYGVFSATEIIVFIMAKECSGAKLSGTVFAVTNMIISLAGAIFQPLVGKLLDTFGDSGIVAGEHIYTVDDYQVALS
ILPISLLLVTILAFFIKDKDHSNNS
>Mature_425_residues
MQKHLNNMTTKKQISYGVLVCFIGAVFYCYEFILRIVPGALQTELSTALGHISATTFGQISALYYFAYSPMQMPVGMLMD
RYGPRRLLTFACLCCALGSWMFTLTWSIVLVGIGRFLVGFGSSFAFVGVLSLALHWLPRRYFSLVAGLITTLGMLGLVYG
EIKITEWSEVIGWDHVLMHIAMIGSALCILTFFVVRDGPEGYQPNKYPWPEFFHNVLKVLTSHEVWLIGFVGACLYTSLS
VFGELWGKTYLEQAHHLTKVEAAKTVSAVFLGWAVGAPLAGYISDVTRRRLLPLVIGAIVSLICISFVLYCPGLSYLTLN
ILLFLYGVFSATEIIVFIMAKECSGAKLSGTVFAVTNMIISLAGAIFQPLVGKLLDTFGDSGIVAGEHIYTVDDYQVALS
ILPISLLLVTILAFFIKDKDHSNNS

Specific function: Uptake Of D-Galactarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46830; Mature: 46830

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA