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The map label for this gene is icmD

Identifier: 54293447

GI number: 54293447

Start: 539045

End: 539443

Strand: Direct

Name: icmD

Synonym: lpl0496

Alternate gene names: NA

Gene position: 539045-539443 (Clockwise)

Preceding gene: 54293446

Following gene: 54293448

Centisome position: 16.11

GC content: 38.35

Gene sequence:

>399_bases
GTGAATATTAAGGTTATCCATAAATCAGGTTATAAACACTGGCTAGTAAGCGCAGCTTGTTTGGCTTTATTGACTCTAAT
TTGTCAGGATGCTGCAGCAGGTGTATCGTTAGGTAAAATGGCATCACAAATTACGGGTTCATTTACAAGTCTTACTAAAC
TGATTACAGCGGGCTCTTACTTGGCTGGATTGGGTTTTTCTATTGGTGCTATTATGAAATTTAAGCAGCACAAGGATAAT
CCTACTCAAATTCCAATTGGAACACCAATAGCTTTGATATTTATCGCTGCTGCATTATTATTCCTTCCTTCTATTTTAGG
AGTGGCCGGAGTAACTATGTTCGGTGGTAGTGGCGGTAAAACTGCTGGACCTACTGGAACAATATATAAGACTAATTAA

Upstream 100 bases:

>100_bases
GTATTTGGGGGAATATTGGCAATCAATATTGTTGGTACAATTGATATGATTAACAATACTTTATATGGTACTTAAGCTAA
TTTAAAAACAGGAGAGAATT

Downstream 100 bases:

>100_bases
TAGAGAGATTATTTATATTATTTGGGTAAAGAGAATAACGCTTTACCCAATTTAATTTATAGGCTTTTTATTGTGTTAAA
TAGTAAATTTAAATGATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNIKVIHKSGYKHWLVSAACLALLTLICQDAAAGVSLGKMASQITGSFTSLTKLITAGSYLAGLGFSIGAIMKFKQHKDN
PTQIPIGTPIALIFIAAALLFLPSILGVAGVTMFGGSGGKTAGPTGTIYKTN

Sequences:

>Translated_132_residues
MNIKVIHKSGYKHWLVSAACLALLTLICQDAAAGVSLGKMASQITGSFTSLTKLITAGSYLAGLGFSIGAIMKFKQHKDN
PTQIPIGTPIALIFIAAALLFLPSILGVAGVTMFGGSGGKTAGPTGTIYKTN
>Mature_132_residues
MNIKVIHKSGYKHWLVSAACLALLTLICQDAAAGVSLGKMASQITGSFTSLTKLITAGSYLAGLGFSIGAIMKFKQHKDN
PTQIPIGTPIALIFIAAALLFLPSILGVAGVTMFGGSGGKTAGPTGTIYKTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13540; Mature: 13540

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKVIHKSGYKHWLVSAACLALLTLICQDAAAGVSLGKMASQITGSFTSLTKLITAGSY
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHH
LAGLGFSIGAIMKFKQHKDNPTQIPIGTPIALIFIAAALLFLPSILGVAGVTMFGGSGGK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TAGPTGTIYKTN
CCCCCCCEEECC
>Mature Secondary Structure
MNIKVIHKSGYKHWLVSAACLALLTLICQDAAAGVSLGKMASQITGSFTSLTKLITAGSY
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHH
LAGLGFSIGAIMKFKQHKDNPTQIPIGTPIALIFIAAALLFLPSILGVAGVTMFGGSGGK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TAGPTGTIYKTN
CCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA