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The map label for this gene is secE [H]

Identifier: 54293308

GI number: 54293308

Start: 415730

End: 416101

Strand: Direct

Name: secE [H]

Synonym: lpl0356

Alternate gene names: 54293308

Gene position: 415730-416101 (Clockwise)

Preceding gene: 54293307

Following gene: 54293309

Centisome position: 12.43

GC content: 35.75

Gene sequence:

>372_bases
ATGAAAAGTTCAAACGAAAATCAAGGTAAGATAAAAGATATAATGTCCTGGCTAGCTATCATATTAGCTACAGCAGGAGC
TTTTGTATGTACTTACTATTATACGTTCACAGGACCAATTCAATCGATAATATGGCTTGCTTGGCTTATTTTGATCCTTT
TCTTGGGTTACTTAACAACAACAGGTAAAAGAGTCTTTGTGTTTGCGCAAGAAGCAAAAGTTGAATTATTAAAAGTAGTT
TGGCCTACACGGCAAGAAACAATACAGACAACTACTATAGTAATGGTGATGGTTGGATTGACAGGATTTATACTCTGGGG
AGTAGATTCAATCATGATGTGGGCAATTGCTAAGTTAACACATTTAGGGTGA

Upstream 100 bases:

>100_bases
CAATAAAATTTAGGCCAGTAGCTCAATTGGCAGAGTGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATTCCCTCCTGG
CCTGCCAACTACAAGTAAAT

Downstream 100 bases:

>100_bases
ATATGGTTGAGGAAAACAAAGCAAAACAGTGGTACGTTGTACATGCCTATTCAGGATATGAAAATTTTGTCATGCGCGAA
ATAACTTCTCGTGCAAAACA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKSSNENQGKIKDIMSWLAIILATAGAFVCTYYYTFTGPIQSIIWLAWLILILFLGYLTTTGKRVFVFAQEAKVELLKVV
WPTRQETIQTTTIVMVMVGLTGFILWGVDSIMMWAIAKLTHLG

Sequences:

>Translated_123_residues
MKSSNENQGKIKDIMSWLAIILATAGAFVCTYYYTFTGPIQSIIWLAWLILILFLGYLTTTGKRVFVFAQEAKVELLKVV
WPTRQETIQTTTIVMVMVGLTGFILWGVDSIMMWAIAKLTHLG
>Mature_123_residues
MKSSNENQGKIKDIMSWLAIILATAGAFVCTYYYTFTGPIQSIIWLAWLILILFLGYLTTTGKRVFVFAQEAKVELLKVV
WPTRQETIQTTTIVMVMVGLTGFILWGVDSIMMWAIAKLTHLG

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=128, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13882; Mature: 13882

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSNENQGKIKDIMSWLAIILATAGAFVCTYYYTFTGPIQSIIWLAWLILILFLGYLTT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGKRVFVFAQEAKVELLKVVWPTRQETIQTTTIVMVMVGLTGFILWGVDSIMMWAIAKLT
CCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLG
HCC
>Mature Secondary Structure
MKSSNENQGKIKDIMSWLAIILATAGAFVCTYYYTFTGPIQSIIWLAWLILILFLGYLTT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGKRVFVFAQEAKVELLKVVWPTRQETIQTTTIVMVMVGLTGFILWGVDSIMMWAIAKLT
CCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLG
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]