Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020475
Identifier: 54020475
GI number: 54020475
Start: 426125
End: 427096
Strand: Reverse
Name: 54020475
Synonym: mhp361
Alternate gene names: NA
Gene position: 427096-426125 (Counterclockwise)
Preceding gene: 54020476
Following gene: 54020474
Centisome position: 47.84
GC content: 21.5
Gene sequence:
>972_bases ATGCATCCTTGTTTTGTAATTTCTAAATTTGATTTTAACAAAAATGATTTAAATAACTTGTTATACTTTTATTATCCGAT TATTGGATCGCAATGCTCTACATTATTTCGATACCTTTTAAGTATTAAAAATGTTGATGAGACAGTGGATTATGAATTTT TAGAAAAAATTTTTGAAATTAATTTTGAAAATTTTAATAAAAATCGGGAAATTTTAGAATCACTAAATTTGATTGAAACA TTTTATGATTCTGAACAAAAAAAATATTTTATTAATTTAAAGGCTCCATTGAATTCAAATCAAATCGATAAAAATCCATA TCTTAAATCATTAATTGTTCAAAAAATAACATTATCCACATATACAAATTTAATTCAAAAATTTAAAAATACACAAAAAA TTAGTAAAAATAAGCAAATTGATACATTAAATTTACGTAATCTTTCAAAAAAATTTTATGAACTCTTCGAGTTGAATAGC GAAAAAATTAATAATTTACTTACTTTTCCAGAAGATTTTGATAATGAAAAAGCAAAAAAAGGCTTGGATTTTGAGGACTA TCATCTATATCTAGCAAAAAAAATAATACGACCACGGGTGCGAAATGCATTAAAAGCATACCAAAATGAAAGGAATTTTT CAAATTATGCAATTAACTGTGTAATTGATTATTGTTATAAAACTAATAATCAAATAATTTTTAATTATATGAAAAAAATT CTTGATGATTTATGAGATAATAAAATAATTAATGGGGAAGATGTTGAAATTGAATTAAAAGAAATTTTTAAACAGAAACA GAAAAATAGTCAAAAATTACTTATTTTGAAAAACAAAAATAATTTAGTTTACATAGAAGATGAAAAACAACTTGAAAAAA ATAGTAAAGTTTCAAATTTAGAAACAAAAAATAATTTAGGGGAAATTGACTGAATTGTTGATGAATTAAATTCAGGTGAA GGTTGACTCTAA
Upstream 100 bases:
>100_bases TTTACGATGTCAAAATCTCCAATCGAAAATGGAAAAAACCGGGATTTTTCCTAAAATTTTTTTCTAAAATTTTTAAATAA TAATAAAATTTGTAAATATC
Downstream 100 bases:
>100_bases AGAAAAAATTATTAAATTATCAAATTTGTATTAATTTAGTTTTTTATAAGGTAAATTTTTAATGCAATTATAGTGTATTT TTAACTAATAAAAAAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFLEKIFEINFENFNKNREILESLNLIET FYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQKITLSTYTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYELFELNS EKINNLLTFPEDFDNEKAKKGLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIFNYMKKI LDDLWDNKIINGEDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNSKVSNLETKNNLGEIDWIVDELNSGE GWL
Sequences:
>Translated_323_residues MHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFLEKIFEINFENFNKNREILESLNLIET FYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQKITLSTYTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYELFELNS EKINNLLTFPEDFDNEKAKKGLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIFNYMKKI LDDL*DNKIINGEDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNSKVSNLETKNNLGEID*IVDELNSGE G*L >Mature_323_residues MHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFLEKIFEINFENFNKNREILESLNLIET FYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQKITLSTYTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYELFELNS EKINNLLTFPEDFDNEKAKKGLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIFNYMKKI LDDL*DNKIINGEDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNSKVSNLETKNNLGEID*IVDELNSGE G*L
Specific function: Unknown
COG id: COG3611
COG function: function code L; Replication initiation/membrane attachment protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38002; Mature: 38002
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFLEKIFEI CCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHC NFENFNKNREILESLNLIETFYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQKITLST CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH YTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYELFELNSEKINNLLTFPEDFDNEKAKK HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHC GLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIFNYMKKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHEEEEEHHHCCCCHHHHHHHHH LDDLDNKIINGEDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNSKVSNLE HHHHHHCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHCCCCCCCH TKNNLGEIDIVDELNSGEGL HCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MHPCFVISKFDFNKNDLNNLLYFYYPIIGSQCSTLFRYLLSIKNVDETVDYEFLEKIFEI CCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHC NFENFNKNREILESLNLIETFYDSEQKKYFINLKAPLNSNQIDKNPYLKSLIVQKITLST CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH YTNLIQKFKNTQKISKNKQIDTLNLRNLSKKFYELFELNSEKINNLLTFPEDFDNEKAKK HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHC GLDFEDYHLYLAKKIIRPRVRNALKAYQNERNFSNYAINCVIDYCYKTNNQIIFNYMKKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEHEEEEEHHHCCCCHHHHHHHHH LDDLDNKIINGEDVEIELKEIFKQKQKNSQKLLILKNKNNLVYIEDEKQLEKNSKVSNLE HHHHHHCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHCCCCCCCH TKNNLGEIDIVDELNSGEGL HCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA