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The map label for this gene is yqgF [C]

Identifier: 54020386

GI number: 54020386

Start: 217212

End: 217643

Strand: Reverse

Name: yqgF [C]

Synonym: mhp179

Alternate gene names: 54020386

Gene position: 217643-217212 (Counterclockwise)

Preceding gene: 54020387

Following gene: 54020385

Centisome position: 24.38

GC content: 29.86

Gene sequence:

>432_bases
ATGGGAAAATATAACCGAATTTTAGCACTTGATCTTGGCATCAAAACTTGTGGATTTGCAATTTCTGATCAAAACTGAAA
AATTTCCTATCCACTTGAACAGTTTAATTTTAATCGTTATGATTTTGCCAGTGTAATTTCCCGAATTGCATTTTGAATGA
AGGAATATCCAATTTCAATCTTAGTTCTAGGTTATCCTTTAACCTTAGCTGGTAAAATTTCCCCGCGGACAAAAATGGTT
GAATACTTTGCTGATTTAGTAAAAAAAAACTATGAAATTAAAGTGGTTTTTCAAGATGAGCGGCTGACTACAAAACAAGC
TCAAACTTTTTTATTAGATTTAGGAATTTCCTTTAAAAAACGGCAAAAAGTAATTGATAAATTAGCCGCTCAGATAATAT
TAGAAAGATTTTTAAATACAAAAAAAGGATAA

Upstream 100 bases:

>100_bases
AAATTTTAGAAATTTTTACTGGATCAGGAGGTGGAAATTATAAGATTGCCCAGGGAAAAATTCAAAAAAAACCAGAAAAA
GAGGTGTTCATTAAACTTTT

Downstream 100 bases:

>100_bases
AAAAAATGGATAAAACCGACAACAAACCAGAAATTAACCTATCCGATGAAGCTCGTTTAATCATAAAACATAACAAGCTC
AAGGGAAAACAACCCGTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MGKYNRILALDLGIKTCGFAISDQNWKISYPLEQFNFNRYDFASVISRIAFWMKEYPISILVLGYPLTLAGKISPRTKMV
EYFADLVKKNYEIKVVFQDERLTTKQAQTFLLDLGISFKKRQKVIDKLAAQIILERFLNTKKG

Sequences:

>Translated_143_residues
MGKYNRILALDLGIKTCGFAISDQN*KISYPLEQFNFNRYDFASVISRIAF*MKEYPISILVLGYPLTLAGKISPRTKMV
EYFADLVKKNYEIKVVFQDERLTTKQAQTFLLDLGISFKKRQKVIDKLAAQIILERFLNTKKG
>Mature_142_residues
GKYNRILALDLGIKTCGFAISDQN*KISYPLEQFNFNRYDFASVISRIAF*MKEYPISILVLGYPLTLAGKISPRTKMVE
YFADLVKKNYEIKVVFQDERLTTKQAQTFLLDLGISFKKRQKVIDKLAAQIILERFLNTKKG

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 16232; Mature: 16101

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKYNRILALDLGIKTCGFAISDQNKISYPLEQFNFNRYDFASVISRIAFMKEYPISILV
CCCCCEEEEEECCHHHHCEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCEEEEE
LGYPLTLAGKISPRTKMVEYFADLVKKNYEIKVVFQDERLTTKQAQTFLLDLGISFKKRQ
ECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHH
KVIDKLAAQIILERFLNTKKG
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKYNRILALDLGIKTCGFAISDQNKISYPLEQFNFNRYDFASVISRIAFMKEYPISILV
CCCCEEEEEECCHHHHCEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCEEEEE
LGYPLTLAGKISPRTKMVEYFADLVKKNYEIKVVFQDERLTTKQAQTFLLDLGISFKKRQ
ECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHH
KVIDKLAAQIILERFLNTKKG
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA