Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020379
Identifier: 54020379
GI number: 54020379
Start: 206513
End: 207565
Strand: Reverse
Name: 54020379
Synonym: mhp170
Alternate gene names: NA
Gene position: 207565-206513 (Counterclockwise)
Preceding gene: 54020380
Following gene: 54020378
Centisome position: 23.25
GC content: 27.54
Gene sequence:
>1053_bases ATGTTGAAAAAAAAATTTAGAAAAATTTTAGCTTTACTCTTGCCAGTTCCACTTGTTTTTTTAACTTCTTATTCTTGTTG AAGTTCACGAATTAAATCAATTAGATCAGCAATTAATGAAAATTTTGGACCAGATTTTGAACTACCAGAAAAACAGGGAG TTTTTAAAAAACAAGATCCAAGATCATTTGATCTTTATGTATCCGAAGTTAATGCAATGCAGTTAAAATGATTTTTAAAT AAGTCAAGTTTAATTGACTTATCCCAGGAAGAAAAAAACAAAATTTATGCTTCAAAACTCGCAAGATATTATGTTTTTGA TAACAAAAATCGAATATTAGCAGATGAGGATAAATTTAAGGCAGAGCAGGACATTAACCCTACCTTTTTAAAAAAAGTTT TTGAAAAAGCAGCGAATTCTTATTCAGGAGACAAAACAAATAATCAAGGAGTGTCTAATAAAAATAGTTTTGAGAAACTA GATAATTTTAAAATTTACCGCGAGATTTCAAAAATTTTTGATTCTAACTGGCGTTTTCTTGAGGTTAGACTTATAAAACC AGGGATAATTGTACCTGATAAAAGAAATTATATTTTAATAAATGCTTATAAGATTTATTATACAAATCCTGTTGATTTTG AAAAGAAAAATGAGGCAGAAAAAACTGAAAATACTGAAAATCAAGCCCAAAACAATAAAAACTGGCGAATTAAAGCTCCA AATCAAAAACCAGTCACGCTTTTACGACTTCATTGATATAATAAAAATTTAGAAAATCCTTTTAAAATTGAGTTTAATTC AATTGAAAATCCAAATTCTGAATATGACTTACAAATGATAAATGATATTGACCAACCCGAGTCAATAGCTGATTTTGACT TTAATTTTTCAAGGATAAATTCTAAAAATACCTCAGAACCACTTGAAATTTTCCATTCAGAACCATTTATTCGTCTAGTT TCGCAAAGTTTTGCAATCCCTTTTGATGGTGAAATTACAGACTTTGAAGCTGAGGATTTTAAATTTAAATACGTGTTTAA CGAAAAAAATTAA
Upstream 100 bases:
>100_bases AAATTTTCATCTTTTTCCATTTATTTATTGTCTCTTATTAAATTTATCAAAAAAGAAAGTGAAGTTTAAAAAATATCGCT CTTTTTAATTAAAAATCAAA
Downstream 100 bases:
>100_bases ATTTTTTATAATTTTATATTAAATTTACTATTTTTCTTCAATATAATAAAAAAAATTTCAGATTTTTCCATTATGGTAGA AAAAAACGTAAAAAATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MLKKKFRKILALLLPVPLVFLTSYSCWSSRIKSIRSAINENFGPDFELPEKQGVFKKQDPRSFDLYVSEVNAMQLKWFLN KSSLIDLSQEEKNKIYASKLARYYVFDNKNRILADEDKFKAEQDINPTFLKKVFEKAANSYSGDKTNNQGVSNKNSFEKL DNFKIYREISKIFDSNWRFLEVRLIKPGIIVPDKRNYILINAYKIYYTNPVDFEKKNEAEKTENTENQAQNNKNWRIKAP NQKPVTLLRLHWYNKNLENPFKIEFNSIENPNSEYDLQMINDIDQPESIADFDFNFSRINSKNTSEPLEIFHSEPFIRLV SQSFAIPFDGEITDFEAEDFKFKYVFNEKN
Sequences:
>Translated_350_residues MLKKKFRKILALLLPVPLVFLTSYSC*SSRIKSIRSAINENFGPDFELPEKQGVFKKQDPRSFDLYVSEVNAMQLK*FLN KSSLIDLSQEEKNKIYASKLARYYVFDNKNRILADEDKFKAEQDINPTFLKKVFEKAANSYSGDKTNNQGVSNKNSFEKL DNFKIYREISKIFDSNWRFLEVRLIKPGIIVPDKRNYILINAYKIYYTNPVDFEKKNEAEKTENTENQAQNNKNWRIKAP NQKPVTLLRLH*YNKNLENPFKIEFNSIENPNSEYDLQMINDIDQPESIADFDFNFSRINSKNTSEPLEIFHSEPFIRLV SQSFAIPFDGEITDFEAEDFKFKYVFNEKN >Mature_350_residues MLKKKFRKILALLLPVPLVFLTSYSC*SSRIKSIRSAINENFGPDFELPEKQGVFKKQDPRSFDLYVSEVNAMQLK*FLN KSSLIDLSQEEKNKIYASKLARYYVFDNKNRILADEDKFKAEQDINPTFLKKVFEKAANSYSGDKTNNQGVSNKNSFEKL DNFKIYREISKIFDSNWRFLEVRLIKPGIIVPDKRNYILINAYKIYYTNPVDFEKKNEAEKTENTENQAQNNKNWRIKAP NQKPVTLLRLH*YNKNLENPFKIEFNSIENPNSEYDLQMINDIDQPESIADFDFNFSRINSKNTSEPLEIFHSEPFIRLV SQSFAIPFDGEITDFEAEDFKFKYVFNEKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40770; Mature: 40770
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKKFRKILALLLPVPLVFLTSYSCSSRIKSIRSAINENFGPDFELPEKQGVFKKQDPR CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SFDLYVSEVNAMQLKFLNKSSLIDLSQEEKNKIYASKLARYYVFDNKNRILADEDKFKAE CEEEEEECCCEEEEEEECCCCCEECCHHHHHHHHHHHHEEEEEEECCCCEECCCHHHCHH QDINPTFLKKVFEKAANSYSGDKTNNQGVSNKNSFEKLDNFKIYREISKIFDSNWRFLEV CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE RLIKPGIIVPDKRNYILINAYKIYYTNPVDFEKKNEAEKTENTENQAQNNKNWRIKAPNQ EEECCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCHHHHCCCHHHHHCCCCEEEECCCC KPVTLLRLHYNKNLENPFKIEFNSIENPNSEYDLQMINDIDQPESIADFDFNFSRINSKN CCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCHHCCCCCHHHCCCCC TSEPLEIFHSEPFIRLVSQSFAIPFDGEITDFEAEDFKFKYVFNEKN CCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MLKKKFRKILALLLPVPLVFLTSYSCSSRIKSIRSAINENFGPDFELPEKQGVFKKQDPR CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SFDLYVSEVNAMQLKFLNKSSLIDLSQEEKNKIYASKLARYYVFDNKNRILADEDKFKAE CEEEEEECCCEEEEEEECCCCCEECCHHHHHHHHHHHHEEEEEEECCCCEECCCHHHCHH QDINPTFLKKVFEKAANSYSGDKTNNQGVSNKNSFEKLDNFKIYREISKIFDSNWRFLEV CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE RLIKPGIIVPDKRNYILINAYKIYYTNPVDFEKKNEAEKTENTENQAQNNKNWRIKAPNQ EEECCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCHHHHCCCHHHHHCCCCEEEECCCC KPVTLLRLHYNKNLENPFKIEFNSIENPNSEYDLQMINDIDQPESIADFDFNFSRINSKN CCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCCCHHCCCCCHHHCCCCC TSEPLEIFHSEPFIRLVSQSFAIPFDGEITDFEAEDFKFKYVFNEKN CCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA