BacMap

Definition	Mycoplasma hyopneumoniae 232, complete genome.
Accession	NC_006360
Length	892,758

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The map label for this gene is pedD [H]

Identifier: 54020280

GI number: 54020280

Start: 812083

End: 813696

Strand: Direct

Name: pedD [H]

Synonym: mhp644

Alternate gene names: 54020280

Gene position: 812083-813696 (Clockwise)

Preceding gene: 54020279

Following gene: 54020281

Centisome position: 90.96

GC content: 24.1

Gene sequence:

>1614_bases
ATGGTAAAATCTACAAAACATTTCAAATTTATCCTTTGAAATTGATTATATTTGATTTTTACGATTTTTTTTAAAATTTA
TCTCATTGTTGCTCCTTATTTTATTTTTACTTTTATTCTAAATGAAAATTTAACTTTTTTTTGGGTAGCCACAACATCTT
TTTTAGGGGTTAGAATTTTTAATATCTTTTTAGATTTTATGAATCAAGCATATTTTAAAGGGTTTTTGATCTTTCATAAG
ATGAAACTTGCCGAAAAAATAACAAATTTTTTGAAAAAAACGACTTACAAAAAATATAACGAAAATTCAAGTGGGTTTTA
CTATTCGGAAATTGAAAATACAATAGAAAAAAGCGTTTCACAATTTTATGCAAATTTATTGTCCTTTTTGCAAACTCTTT
CCATAATTTTGATGACTTTAGGTTTATTTTTTTATATAAACTGGATTTTAGCGTTAATTATTGTCGGTGTTATAACCTTT
TTTGTAATTACAACTTCTTTACTATCTAAAAAATTAACCAAACTTCAATCCGCAAAATTGCAAGCAATTTCGGATTTTAA
CAATTCTTTAAGCACTTATCTTTTAACTTTGCCGCAATTAAAAACCTTAAATTCTGATGATAAATTCGAATTTATAATTA
ATAAAAGAAACAAGAAAAATTGAATAACTAGAGAAAAATATGGTATATTTTCCGACTTAATTTCATTTTTTAATGAATAT
TCCAATAATTTTTTCTCCGCAATAATCACAATTGGAATTGCATTTTGGACACTTTATTATAAAAATAATAATAGCTCTGA
AATTGTTTTTGCAAATATATCTTTAATTGTTTTAGTGCAATTATCATTTAGTGAGTTTTTTGCAAATGCAAAAACACTTT
TTAATAACTACCCAGCAATAATTTCGGGATGAAAAAATATTAAAAATTTTGAGCAAAAAAACAAACTTAAAGTTGAAAAT
TTAGAAGAAAATTTACAAAATTTAGAAGGAGAAATTTCTTCAATTTTAATTGAGAATTTAAACTTTTATCTACCCGATAG
AAAATTGTTTAATAACCTAACTTTTAAAATTGAAAAAGGGAAAAAATACATAATTCAAGGAGTAAATGGTTCTGGAAAAT
CTACCTTAGCCCGAATTTTATTAGGAGTTGAAAAAGAATTTCAAGGGAAAATAATAGTGAATAATCATTTTGATATCAAA
GATCTTTCCCCTTTTTCTTTAAATAATCACATTAATTATGTCTATAATAACCCAGGTATTATTTACGGAACTATTTTAGA
AAATATTTCGCTGCTAGAGCCTGAAAAAAATAAGAATCCAAAAGAAATTTTAGAAAATATAAACCTTCAAAATTTTAGTT
TACAGGATTCTCTAGACGAAAATAATAGCTTATCAACAGGTCAAATCCAAAAAATTCACCTCGCACGCTCGCTTTATTCT
CCAAAAGAAATTCTCATAATTGACGAGGGGCTTTCGAATTTAGATAAAGAAAATTATGATAAAATTCTACTTAAATTACT
TGAAAATAAGGATTTAACAATAATTTTGATAACTCATCATTTAAATAATGAAAATCTAAATCTTTTTGATCAAGTTATTA
ACCTAAATGTTTAA

Upstream 100 bases:

>100_bases
CTTTCAAAACCGAATAAAACAATTTTTATCGCAAGTCACCACATTCCTGAAAAAATAAAACCGATGTTTGACCAAATAAT
TGAAATTTAAGGAGGAATTT

Downstream 100 bases:

>100_bases
AATTACATATAATTTTAGTTCAAAAGGCTTTAAAAATGAAAAAGCGGTTTTTATTTTTTTATATTAAAATGTTACTTAGA
TTTTACTCAAAAAATTTGGT

Product: ABC transporter ATP binding protein

Products: NA

Alternate protein names: Pediocin AcH transport ATP-binding protein PapD [H]

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MVKSTKHFKFILWNWLYLIFTIFFKIYLIVAPYFIFTFILNENLTFFWVATTSFLGVRIFNIFLDFMNQAYFKGFLIFHK
MKLAEKITNFLKKTTYKKYNENSSGFYYSEIENTIEKSVSQFYANLLSFLQTLSIILMTLGLFFYINWILALIIVGVITF
FVITTSLLSKKLTKLQSAKLQAISDFNNSLSTYLLTLPQLKTLNSDDKFEFIINKRNKKNWITREKYGIFSDLISFFNEY
SNNFFSAIITIGIAFWTLYYKNNNSSEIVFANISLIVLVQLSFSEFFANAKTLFNNYPAIISGWKNIKNFEQKNKLKVEN
LEENLQNLEGEISSILIENLNFYLPDRKLFNNLTFKIEKGKKYIIQGVNGSGKSTLARILLGVEKEFQGKIIVNNHFDIK
DLSPFSLNNHINYVYNNPGIIYGTILENISLLEPEKNKNPKEILENINLQNFSLQDSLDENNSLSTGQIQKIHLARSLYS
PKEILIIDEGLSNLDKENYDKILLKLLENKDLTIILITHHLNNENLNLFDQVINLNV

Sequences:

>Translated_537_residues
MVKSTKHFKFIL*N*LYLIFTIFFKIYLIVAPYFIFTFILNENLTFFWVATTSFLGVRIFNIFLDFMNQAYFKGFLIFHK
MKLAEKITNFLKKTTYKKYNENSSGFYYSEIENTIEKSVSQFYANLLSFLQTLSIILMTLGLFFYINWILALIIVGVITF
FVITTSLLSKKLTKLQSAKLQAISDFNNSLSTYLLTLPQLKTLNSDDKFEFIINKRNKKN*ITREKYGIFSDLISFFNEY
SNNFFSAIITIGIAFWTLYYKNNNSSEIVFANISLIVLVQLSFSEFFANAKTLFNNYPAIISG*KNIKNFEQKNKLKVEN
LEENLQNLEGEISSILIENLNFYLPDRKLFNNLTFKIEKGKKYIIQGVNGSGKSTLARILLGVEKEFQGKIIVNNHFDIK
DLSPFSLNNHINYVYNNPGIIYGTILENISLLEPEKNKNPKEILENINLQNFSLQDSLDENNSLSTGQIQKIHLARSLYS
PKEILIIDEGLSNLDKENYDKILLKLLENKDLTIILITHHLNNENLNLFDQVINLNV
>Mature_537_residues
MVKSTKHFKFIL*N*LYLIFTIFFKIYLIVAPYFIFTFILNENLTFFWVATTSFLGVRIFNIFLDFMNQAYFKGFLIFHK
MKLAEKITNFLKKTTYKKYNENSSGFYYSEIENTIEKSVSQFYANLLSFLQTLSIILMTLGLFFYINWILALIIVGVITF
FVITTSLLSKKLTKLQSAKLQAISDFNNSLSTYLLTLPQLKTLNSDDKFEFIINKRNKKN*ITREKYGIFSDLISFFNEY
SNNFFSAIITIGIAFWTLYYKNNNSSEIVFANISLIVLVQLSFSEFFANAKTLFNNYPAIISG*KNIKNFEQKNKLKVEN
LEENLQNLEGEISSILIENLNFYLPDRKLFNNLTFKIEKGKKYIIQGVNGSGKSTLARILLGVEKEFQGKIIVNNHFDIK
DLSPFSLNNHINYVYNNPGIIYGTILENISLLEPEKNKNPKEILENINLQNFSLQDSLDENNSLSTGQIQKIHLARSLYS
PKEILIIDEGLSNLDKENYDKILLKLLENKDLTIILITHHLNNENLNLFDQVINLNV

Specific function: Involved in the export process of the bacteriocin pediocin PA-1/AcH. Is also essential for pediocin production [H]

COG id: COG1132

COG function: function code V; ABC-type multidrug transport system, ATPase and permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase C39 domain [H]

Homologues:

Organism=Homo sapiens, GI118582255, Length=450, Percent_Identity=22.2222222222222, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI255708477, Length=421, Percent_Identity=24.2280285035629, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI21536378, Length=411, Percent_Identity=24.5742092457421, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI42741659, Length=197, Percent_Identity=28.9340101522843, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI110832837, Length=235, Percent_Identity=27.2340425531915, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI110832835, Length=235, Percent_Identity=27.2340425531915, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI148612844, Length=398, Percent_Identity=22.8643216080402, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI110832839, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI89111135, Length=201, Percent_Identity=28.3582089552239, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI9665248, Length=316, Percent_Identity=25, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI134142342, Length=197, Percent_Identity=29.4416243654822, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI134142345, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI134142340, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI134142337, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI42490749, Length=206, Percent_Identity=26.6990291262136, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI9961250, Length=197, Percent_Identity=27.4111675126904, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI4505771, Length=197, Percent_Identity=27.4111675126904, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI9961252, Length=197, Percent_Identity=27.4111675126904, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1787113, Length=476, Percent_Identity=23.109243697479, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787143, Length=450, Percent_Identity=23.3333333333333, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1786654, Length=502, Percent_Identity=19.5219123505976, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1786698, Length=205, Percent_Identity=26.8292682926829, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI87081791, Length=212, Percent_Identity=27.3584905660377, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787112, Length=277, Percent_Identity=24.9097472924188, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789672, Length=203, Percent_Identity=25.615763546798, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787547, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786398, Length=191, Percent_Identity=29.8429319371728, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1789873, Length=206, Percent_Identity=28.6407766990291, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081709, Length=202, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787758, Length=181, Percent_Identity=28.1767955801105, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789032, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787712, Length=217, Percent_Identity=25.3456221198157, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1787370, Length=204, Percent_Identity=26.9607843137255, Blast_Score=62, Evalue=8e-11,
Organism=Escherichia coli, GI1787089, Length=212, Percent_Identity=27.8301886792453, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI193208177, Length=248, Percent_Identity=35.0806451612903, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI115534520, Length=445, Percent_Identity=24.2696629213483, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI193209708, Length=423, Percent_Identity=24.5862884160757, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17558664, Length=473, Percent_Identity=23.6786469344609, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115535101, Length=493, Percent_Identity=22.7180527383367, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193202349, Length=506, Percent_Identity=21.5415019762846, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17541710, Length=426, Percent_Identity=24.8826291079812, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71988343, Length=500, Percent_Identity=23, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115533592, Length=475, Percent_Identity=21.6842105263158, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI86564969, Length=567, Percent_Identity=23.4567901234568, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI25146765, Length=567, Percent_Identity=23.4567901234568, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71992066, Length=567, Percent_Identity=23.4567901234568, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI71992070, Length=567, Percent_Identity=23.4567901234568, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193211015, Length=412, Percent_Identity=26.6990291262136, Blast_Score=79, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=412, Percent_Identity=26.6990291262136, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17569143, Length=434, Percent_Identity=23.2718894009217, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=204, Percent_Identity=26.9607843137255, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25146777, Length=466, Percent_Identity=25.3218884120172, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=201, Percent_Identity=31.8407960199005, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=192, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17569145, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=461, Percent_Identity=25.3796095444685, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551702, Length=208, Percent_Identity=28.3653846153846, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551700, Length=208, Percent_Identity=28.3653846153846, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17569081, Length=561, Percent_Identity=22.1033868092692, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=219, Percent_Identity=24.6575342465753, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=448, Percent_Identity=22.7678571428571, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=203, Percent_Identity=29.064039408867, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17511077, Length=206, Percent_Identity=26.2135922330097, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=188, Percent_Identity=28.1914893617021, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71996550, Length=204, Percent_Identity=28.4313725490196, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71992080, Length=204, Percent_Identity=32.3529411764706, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=223, Percent_Identity=25.5605381165919, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=202, Percent_Identity=33.6633663366337, Blast_Score=91, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6321720, Length=217, Percent_Identity=30.4147465437788, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6323959, Length=227, Percent_Identity=29.0748898678414, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323217, Length=209, Percent_Identity=32.5358851674641, Blast_Score=74, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6322640, Length=416, Percent_Identity=22.8365384615385, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320339, Length=191, Percent_Identity=28.7958115183246, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24659289, Length=461, Percent_Identity=23.2104121475054, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24653245, Length=409, Percent_Identity=21.5158924205379, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281363262, Length=409, Percent_Identity=21.5158924205379, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI85726357, Length=508, Percent_Identity=21.259842519685, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI23397593, Length=219, Percent_Identity=26.9406392694064, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24649703, Length=516, Percent_Identity=21.7054263565891, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281361582, Length=548, Percent_Identity=24.2700729927007, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641565, Length=216, Percent_Identity=28.2407407407407, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI45552361, Length=425, Percent_Identity=23.0588235294118, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI45552349, Length=425, Percent_Identity=23.0588235294118, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24648279, Length=206, Percent_Identity=27.6699029126214, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45552337, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552347, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552341, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552335, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552359, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45550972, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552339, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552355, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17136662, Length=192, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552363, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552351, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24583969, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552357, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552343, Length=235, Percent_Identity=25.9574468085106, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552353, Length=235, Percent_Identity=25.9574468085106, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45552345, Length=235, Percent_Identity=25.9574468085106, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574259, Length=193, Percent_Identity=27.979274611399, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24650986, Length=469, Percent_Identity=21.3219616204691, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21358185, Length=469, Percent_Identity=21.3219616204691, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI45552437, Length=208, Percent_Identity=29.3269230769231, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24585557, Length=208, Percent_Identity=29.3269230769231, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR001140
- InterPro:   IPR011527
- InterPro:   IPR003593
- InterPro:   IPR005897
- InterPro:   IPR005074 [H]

Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran; PF03412 Peptidase_C39 [H]

EC number: NA

Molecular weight: Translated: 61791; Mature: 61791

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSTKHFKFILNLYLIFTIFFKIYLIVAPYFIFTFILNENLTFFWVATTSFLGVRIFNI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
FLDFMNQAYFKGFLIFHKMKLAEKITNFLKKTTYKKYNENSSGFYYSEIENTIEKSVSQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
YANLLSFLQTLSIILMTLGLFFYINWILALIIVGVITFFVITTSLLSKKLTKLQSAKLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISDFNNSLSTYLLTLPQLKTLNSDDKFEFIINKRNKKNITREKYGIFSDLISFFNEYSNN
HHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
FFSAIITIGIAFWTLYYKNNNSSEIVFANISLIVLVQLSFSEFFANAKTLFNNYPAIISG
HHHHHHHHHHHHHEEEEECCCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHHCCCCCEEEC
KNIKNFEQKNKLKVENLEENLQNLEGEISSILIENLNFYLPDRKLFNNLTFKIEKGKKYI
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEECCCEEE
IQGVNGSGKSTLARILLGVEKEFQGKIIVNNHFDIKDLSPFSLNNHINYVYNNPGIIYGT
EECCCCCCHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEH
ILENISLLEPEKNKNPKEILENINLQNFSLQDSLDENNSLSTGQIQKIHLARSLYSPKEI
HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEE
LIIDEGLSNLDKENYDKILLKLLENKDLTIILITHHLNNENLNLFDQVINLNV
EEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MVKSTKHFKFILNLYLIFTIFFKIYLIVAPYFIFTFILNENLTFFWVATTSFLGVRIFNI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
FLDFMNQAYFKGFLIFHKMKLAEKITNFLKKTTYKKYNENSSGFYYSEIENTIEKSVSQF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHH
YANLLSFLQTLSIILMTLGLFFYINWILALIIVGVITFFVITTSLLSKKLTKLQSAKLQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISDFNNSLSTYLLTLPQLKTLNSDDKFEFIINKRNKKNITREKYGIFSDLISFFNEYSNN
HHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
FFSAIITIGIAFWTLYYKNNNSSEIVFANISLIVLVQLSFSEFFANAKTLFNNYPAIISG
HHHHHHHHHHHHHEEEEECCCCCEEEEEEEEEEEEEEEHHHHHHHHHHHHHCCCCCEEEC
KNIKNFEQKNKLKVENLEENLQNLEGEISSILIENLNFYLPDRKLFNNLTFKIEKGKKYI
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEECCCEEE
IQGVNGSGKSTLARILLGVEKEFQGKIIVNNHFDIKDLSPFSLNNHINYVYNNPGIIYGT
EECCCCCCHHHHHHHHHHCCHHHCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEH
ILENISLLEPEKNKNPKEILENINLQNFSLQDSLDENNSLSTGQIQKIHLARSLYSPKEI
HHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEE
LIIDEGLSNLDKENYDKILLKLLENKDLTIILITHHLNNENLNLFDQVINLNV
EEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1514784; 7764941 [H]