Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020262
Identifier: 54020262
GI number: 54020262
Start: 769029
End: 770402
Strand: Direct
Name: 54020262
Synonym: mhp616
Alternate gene names: NA
Gene position: 769029-770402 (Clockwise)
Preceding gene: 54020261
Following gene: 54020263
Centisome position: 86.14
GC content: 29.18
Gene sequence:
>1374_bases ATGCAAAAAAGTAAGAAAAATTTATTTAAAAAAATAATCAAAATTTCTCTTTTTGGTATTTTTTCAACTTTATTTGTAAT TTCTTCTACTAATAACAATCTACAAAATCAATCTGTTATTAGTAGAAGAAATACGGAAAATTGAAGTGAAAATTCTCAAA ATGCATATAAAGTTAGTCAAATGGCTTCTGTTAATAACGTTGACGAAGATGAAATTTCACAAGCAATTCTAAAAATCAAA CCAAGAGAAGATGAGTTTGTCCCAGCAATCCCACTTTTATTTGGGGCGCTTGGCGGAATTCTATTTGGCGGGGTATTTTC AAGTTGACTTGGCCAAAATCCACTACCCGAATTACCTCGATTGGGCAATGTTGGCTCATATGCCCCACAAATTGACCAAA AACCAAGTCAAAATACTGAGAAAAAAGTATCAAAAAGGTATGAAAATAATTCATACCAAAATTCTTTTCTTGATTATTTC CAAAAAACTGAAAAAAAATCTAAAATTGAGAATTCTGGACCTGTATATGGGCCATTTTTACCGGGCGAAGATAAGCGCGA ACTCAACCCAATTGTGGCAAAAAGTGCTAATTCAATCACAATTGATCTTAATATTTTATCGATAATAACCAAAACAAAAT TATCAGAGAGAGTTGCAGCCTTAAGCAGAGTCGAATTCGTCGAAATTACTGATAGGAAAAAATTAAAAGATTATAAAGAT ATTCATCTTGCATACTTTTTTGACGAAGTTCCAGGTGGAAAACCAAAATTTATAATTAGCAAAACTAAAATTAGTGAACC GGTTGCTTGAGAGCTTTCAATTTTAGGTCTACAAATTGAATTAGGAATTCCAGAAATTTTAGAAAAAAATTTCTTCCCAA ATATTCGATTACAACCATTAAATTTAATAGAAAAATTTTTGAAAAGATTAATGTTTAGACCTAATTTTTATTCTTATAGT AAACATAAAATGCAGCAATTAGCATACAAAATTGCCGCCACAATCAACACAATAAATTATGGAAATTTAGGATACAATAT TCCATATTTAAATAATGATAATGATCCAAATTATCCCAAAAGTTATTATATTGTTGAAGATTTTTATGAAGAAATATTTG ATAAAAACGAAAATTGATACATAAATATGCCATCGGGGGAAACGTGATATTTGGATGGAAAGGAAGAAATAGAGGAGGAA AAGGAAAAATATAGAAAAAAAATAGCGAAAAAAAGTATTTTTTTTAAAAATTACCATGTTAGACGACATAAATTGCATCC TAATAATAAAAAAGATAGAGCTTGAGAACCAAACCTAAAAAGAGTTGAAGGAATTCACTATTTATATGGAGACCCAGTCA AATTCCCTTATTAA
Upstream 100 bases:
>100_bases AAATTTATTTTTTTTTTTTTTTTTTTTTGATAAAGTTACATTATAAAAACGTATTATCTACTTAGATAAAATACTAAAAA ATTAGAGGAAACAAAAAAAG
Downstream 100 bases:
>100_bases AATTAAGGAAACATTTTTAGAAAATAGATATCGAGAAGTAAATGTCCGAGATTTTTTTTCAACAAGAAACATTTATATGC ACTGGAAAGAACCTTATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MQKSKKNLFKKIIKISLFGIFSTLFVISSTNNNLQNQSVISRRNTENWSENSQNAYKVSQMASVNNVDEDEISQAILKIK PREDEFVPAIPLLFGALGGILFGGVFSSWLGQNPLPELPRLGNVGSYAPQIDQKPSQNTEKKVSKRYENNSYQNSFLDYF QKTEKKSKIENSGPVYGPFLPGEDKRELNPIVAKSANSITIDLNILSIITKTKLSERVAALSRVEFVEITDRKKLKDYKD IHLAYFFDEVPGGKPKFIISKTKISEPVAWELSILGLQIELGIPEILEKNFFPNIRLQPLNLIEKFLKRLMFRPNFYSYS KHKMQQLAYKIAATINTINYGNLGYNIPYLNNDNDPNYPKSYYIVEDFYEEIFDKNENWYINMPSGETWYLDGKEEIEEE KEKYRKKIAKKSIFFKNYHVRRHKLHPNNKKDRAWEPNLKRVEGIHYLYGDPVKFPY
Sequences:
>Translated_457_residues MQKSKKNLFKKIIKISLFGIFSTLFVISSTNNNLQNQSVISRRNTEN*SENSQNAYKVSQMASVNNVDEDEISQAILKIK PREDEFVPAIPLLFGALGGILFGGVFSS*LGQNPLPELPRLGNVGSYAPQIDQKPSQNTEKKVSKRYENNSYQNSFLDYF QKTEKKSKIENSGPVYGPFLPGEDKRELNPIVAKSANSITIDLNILSIITKTKLSERVAALSRVEFVEITDRKKLKDYKD IHLAYFFDEVPGGKPKFIISKTKISEPVA*ELSILGLQIELGIPEILEKNFFPNIRLQPLNLIEKFLKRLMFRPNFYSYS KHKMQQLAYKIAATINTINYGNLGYNIPYLNNDNDPNYPKSYYIVEDFYEEIFDKNEN*YINMPSGET*YLDGKEEIEEE KEKYRKKIAKKSIFFKNYHVRRHKLHPNNKKDRA*EPNLKRVEGIHYLYGDPVKFPY >Mature_457_residues MQKSKKNLFKKIIKISLFGIFSTLFVISSTNNNLQNQSVISRRNTEN*SENSQNAYKVSQMASVNNVDEDEISQAILKIK PREDEFVPAIPLLFGALGGILFGGVFSS*LGQNPLPELPRLGNVGSYAPQIDQKPSQNTEKKVSKRYENNSYQNSFLDYF QKTEKKSKIENSGPVYGPFLPGEDKRELNPIVAKSANSITIDLNILSIITKTKLSERVAALSRVEFVEITDRKKLKDYKD IHLAYFFDEVPGGKPKFIISKTKISEPVA*ELSILGLQIELGIPEILEKNFFPNIRLQPLNLIEKFLKRLMFRPNFYSYS KHKMQQLAYKIAATINTINYGNLGYNIPYLNNDNDPNYPKSYYIVEDFYEEIFDKNEN*YINMPSGET*YLDGKEEIEEE KEKYRKKIAKKSIFFKNYHVRRHKLHPNNKKDRA*EPNLKRVEGIHYLYGDPVKFPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51942; Mature: 51942
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKSKKNLFKKIIKISLFGIFSTLFVISSTNNNLQNQSVISRRNTENSENSQNAYKVSQM CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH ASVNNVDEDEISQAILKIKPREDEFVPAIPLLFGALGGILFGGVFSSLGQNPLPELPRLG HHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NVGSYAPQIDQKPSQNTEKKVSKRYENNSYQNSFLDYFQKTEKKSKIENSGPVYGPFLPG CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC EDKRELNPIVAKSANSITIDLNILSIITKTKLSERVAALSRVEFVEITDRKKLKDYKDIH CCCHHCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHEE LAYFFDEVPGGKPKFIISKTKISEPVAELSILGLQIELGIPEILEKNFFPNIRLQPLNLI EEEEEHHCCCCCCEEEEEHHHHHCHHHHHHEEEEEEECCCHHHHHHCCCCCCEECHHHHH EKFLKRLMFRPNFYSYSKHKMQQLAYKIAATINTINYGNLGYNIPYLNNDNDPNYPKSYY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCEE IVEDFYEEIFDKNENYINMPSGETYLDGKEEIEEEKEKYRKKIAKKSIFFKNYHVRRHKL EHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCC HPNNKKDRAEPNLKRVEGIHYLYGDPVKFPY CCCCCCCCCCCCHHHHCCEEEECCCCCCCCC >Mature Secondary Structure MQKSKKNLFKKIIKISLFGIFSTLFVISSTNNNLQNQSVISRRNTENSENSQNAYKVSQM CCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH ASVNNVDEDEISQAILKIKPREDEFVPAIPLLFGALGGILFGGVFSSLGQNPLPELPRLG HHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NVGSYAPQIDQKPSQNTEKKVSKRYENNSYQNSFLDYFQKTEKKSKIENSGPVYGPFLPG CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC EDKRELNPIVAKSANSITIDLNILSIITKTKLSERVAALSRVEFVEITDRKKLKDYKDIH CCCHHCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHEE LAYFFDEVPGGKPKFIISKTKISEPVAELSILGLQIELGIPEILEKNFFPNIRLQPLNLI EEEEEHHCCCCCCEEEEEHHHHHCHHHHHHEEEEEEECCCHHHHHHCCCCCCEECHHHHH EKFLKRLMFRPNFYSYSKHKMQQLAYKIAATINTINYGNLGYNIPYLNNDNDPNYPKSYY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCEE IVEDFYEEIFDKNENYINMPSGETYLDGKEEIEEEKEKYRKKIAKKSIFFKNYHVRRHKL EHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCC HPNNKKDRAEPNLKRVEGIHYLYGDPVKFPY CCCCCCCCCCCCHHHHCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA