Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020236
Identifier: 54020236
GI number: 54020236
Start: 661713
End: 663413
Strand: Direct
Name: 54020236
Synonym: mhp530
Alternate gene names: NA
Gene position: 661713-663413 (Clockwise)
Preceding gene: 54020235
Following gene: 54020237
Centisome position: 74.12
GC content: 32.45
Gene sequence:
>1701_bases ATGTTTGGTTGGTTAATTAATCAAATTTCTTATGCTTTCTTTGCTGGGTTTTGGTATTTGTTCTGTTGGTTCCCCCTTGT AATTATCAGGGTAATTACTACTTTATTTGGATCTATTAATTTTAATTTACTAAAAGGTTTATTTTTTGGAACTTCAAAAG AATTTTCTATTAATAAAATTCCGATAGCTTTTTGAATTTTTGTTGGTCTTGCCGTTTCTATTTTTATTTTCATTGTTCTT TATCGGCTTTCAAAAAGTTTTTTCTTTGGTTCAAAAAATGCTTATGGACAAACAAATGAGTCCGAAGTTAAAAATATTAT TCTTAAAACGCTTTCCGCGATCGGTTTTCCGATTTTATTTACTGGGTTTTTATTTATTTTACTAATTGGTTCAAATATTG TTTTGATGGAGATCAAAGAAAGTCTTGCTTATAATAACGATCTAAATACTTCCCTGATTAAAGGTGCTTCTGGTGATTTA AAATTAGGACAGCTAGAAATTAGTAATTTATCTAAAGGAAGTATTGTATCTTATGATGCCTATACAAATTTTTCCTGAGG ACAAGGCCCAAAATTAATTTTACTTGTACTTTTATCAAGTCTGACTGTTGCTTGACTTTTAGGGACAACACTGACTTCAC TAGTAGCAAATATTGCCCAGATGTTCTATCAACTACTTTTACTGCCCGTTTTTTCGGTTTCCCAGATCAGCGATGATGGA AAATTATTTAAAAAATATTTAAATAGTTTTTGGGCAAAATTTTGGGTTGTGATTATTTATCAGGTTTCCTTTTTATTCTT TTTTGTCTGGACAGAATATTCACTGAATGCCTGGGATTTTATCAAAGATGAAAAAACGGAATATGGAGGAATAGCAAATT GACTGCTTAGTTTTGTTTTTTCTTTGGTAATGATTTTAGGTGGGGGGATAGCAATCAAGACGATTTCCCAGGAATTTGCC GGTTATTTTGGAGGGGAAGGATTTATAAGATCACAACAGGAATGAGCACACCGGACAGCAAAAGGAGTTGTTGCTAGCGC GGGACTTCTAGCAGCCGCGCCGGCAATTGCGCGGAAACAGTTTCGAAAAGGGGCAAGACTAACGGGATATTTTGACTCAG AAAAGGCAAAAATTAAAGATGACTACCGCAAAGGAATAATAACAAATACCCAAAGAAAATTACGGCTTAATGAATTAGCA AATAAAAAAGCGGAATTAGGACAGACATTCCGGGCCGGCTGAAACAATAATAGTGATAAAAACTTTTTAAGGCGAGCCTG AGCGGCAAAAGAGGCTTGAAAAGAATCAAAAGATATGGGAATTATTGAAGGAAAAGGCTATTCACTTTCAAAAACTTGAT CAAAAATTACTGACTGAAGAGCCCAAAGAGCTCAGCAAAAACTTGATAATCTCAAAAATCAACTACCAGATACAGATCCA AAAACACTAAAACAGGCCCAAAAATTAGAAAAATTACAACATAAACAAGAAAAAGCTAACCAAAAATTTGCTAAAAGGTC AAAAAATCTTTATGAAACTGTCCAAATTAGAAATGATACTGATTACCGCCTTCACAGTTCTTATCAAAATTCTTATGATA AAACAGTTCATGATAAAATCCCTGAAAAAACTAATCCAGATAATTTAAAAGAAAAAAAAGAGGATAAAAAAGAAAATAAT GAAAAAACAAATTCAAAATAA
Upstream 100 bases:
>100_bases TGGTTCAGGAATCCAGAAAATAGCAGCACCACAAACACAGTCAAAAATAATAACTAATAGCTTTTTAAATTATTTATTTT AAATATTTTTTAGACAAAAA
Downstream 100 bases:
>100_bases GGCAATTTCAAAAATAAATCTTCATATTTTTCGAAATTTTACTATCTGGGACTTATTAGTTTTAACACTTATTATTCTTT TATCACTTGTTTTTGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MFGWLINQISYAFFAGFWYLFCWFPLVIIRVITTLFGSINFNLLKGLFFGTSKEFSINKIPIAFWIFVGLAVSIFIFIVL YRLSKSFFFGSKNAYGQTNESEVKNIILKTLSAIGFPILFTGFLFILLIGSNIVLMEIKESLAYNNDLNTSLIKGASGDL KLGQLEISNLSKGSIVSYDAYTNFSWGQGPKLILLVLLSSLTVAWLLGTTLTSLVANIAQMFYQLLLLPVFSVSQISDDG KLFKKYLNSFWAKFWVVIIYQVSFLFFFVWTEYSLNAWDFIKDEKTEYGGIANWLLSFVFSLVMILGGGIAIKTISQEFA GYFGGEGFIRSQQEWAHRTAKGVVASAGLLAAAPAIARKQFRKGARLTGYFDSEKAKIKDDYRKGIITNTQRKLRLNELA NKKAELGQTFRAGWNNNSDKNFLRRAWAAKEAWKESKDMGIIEGKGYSLSKTWSKITDWRAQRAQQKLDNLKNQLPDTDP KTLKQAQKLEKLQHKQEKANQKFAKRSKNLYETVQIRNDTDYRLHSSYQNSYDKTVHDKIPEKTNPDNLKEKKEDKKENN EKTNSK
Sequences:
>Translated_566_residues MFGWLINQISYAFFAGFWYLFCWFPLVIIRVITTLFGSINFNLLKGLFFGTSKEFSINKIPIAF*IFVGLAVSIFIFIVL YRLSKSFFFGSKNAYGQTNESEVKNIILKTLSAIGFPILFTGFLFILLIGSNIVLMEIKESLAYNNDLNTSLIKGASGDL KLGQLEISNLSKGSIVSYDAYTNFS*GQGPKLILLVLLSSLTVA*LLGTTLTSLVANIAQMFYQLLLLPVFSVSQISDDG KLFKKYLNSFWAKFWVVIIYQVSFLFFFVWTEYSLNAWDFIKDEKTEYGGIAN*LLSFVFSLVMILGGGIAIKTISQEFA GYFGGEGFIRSQQE*AHRTAKGVVASAGLLAAAPAIARKQFRKGARLTGYFDSEKAKIKDDYRKGIITNTQRKLRLNELA NKKAELGQTFRAG*NNNSDKNFLRRA*AAKEA*KESKDMGIIEGKGYSLSKT*SKITD*RAQRAQQKLDNLKNQLPDTDP KTLKQAQKLEKLQHKQEKANQKFAKRSKNLYETVQIRNDTDYRLHSSYQNSYDKTVHDKIPEKTNPDNLKEKKEDKKENN EKTNSK >Mature_566_residues MFGWLINQISYAFFAGFWYLFCWFPLVIIRVITTLFGSINFNLLKGLFFGTSKEFSINKIPIAF*IFVGLAVSIFIFIVL YRLSKSFFFGSKNAYGQTNESEVKNIILKTLSAIGFPILFTGFLFILLIGSNIVLMEIKESLAYNNDLNTSLIKGASGDL KLGQLEISNLSKGSIVSYDAYTNFS*GQGPKLILLVLLSSLTVA*LLGTTLTSLVANIAQMFYQLLLLPVFSVSQISDDG KLFKKYLNSFWAKFWVVIIYQVSFLFFFVWTEYSLNAWDFIKDEKTEYGGIAN*LLSFVFSLVMILGGGIAIKTISQEFA GYFGGEGFIRSQQE*AHRTAKGVVASAGLLAAAPAIARKQFRKGARLTGYFDSEKAKIKDDYRKGIITNTQRKLRLNELA NKKAELGQTFRAG*NNNSDKNFLRRA*AAKEA*KESKDMGIIEGKGYSLSKT*SKITD*RAQRAQQKLDNLKNQLPDTDP KTLKQAQKLEKLQHKQEKANQKFAKRSKNLYETVQIRNDTDYRLHSSYQNSYDKTVHDKIPEKTNPDNLKEKKEDKKENN EKTNSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62605; Mature: 62605
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGWLINQISYAFFAGFWYLFCWFPLVIIRVITTLFGSINFNLLKGLFFGTSKEFSINKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC PIAFIFVGLAVSIFIFIVLYRLSKSFFFGSKNAYGQTNESEVKNIILKTLSAIGFPILFT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHH GFLFILLIGSNIVLMEIKESLAYNNDLNTSLIKGASGDLKLGQLEISNLSKGSIVSYDAY HHHHHHHHCCCEEEEHHHHHHHCCCCCCHHHHCCCCCCCEECEEEECCCCCCCEEEEECC TNFSGQGPKLILLVLLSSLTVALLGTTLTSLVANIAQMFYQLLLLPVFSVSQISDDGKLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KKYLNSFWAKFWVVIIYQVSFLFFFVWTEYSLNAWDFIKDEKTEYGGIANLLSFVFSLVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHH ILGGGIAIKTISQEFAGYFGGEGFIRSQQEAHRTAKGVVASAGLLAAAPAIARKQFRKGA HHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RLTGYFDSEKAKIKDDYRKGIITNTQRKLRLNELANKKAELGQTFRAGNNNSDKNFLRRA CEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AAKEAKESKDMGIIEGKGYSLSKTSKITDRAQRAQQKLDNLKNQLPDTDPKTLKQAQKLE HHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KLQHKQEKANQKFAKRSKNLYETVQIRNDTDYRLHSSYQNSYDKTVHDKIPEKTNPDNLK HHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH EKKEDKKENNEKTNSK HHHHHHHHCCCCCCCC >Mature Secondary Structure MFGWLINQISYAFFAGFWYLFCWFPLVIIRVITTLFGSINFNLLKGLFFGTSKEFSINKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC PIAFIFVGLAVSIFIFIVLYRLSKSFFFGSKNAYGQTNESEVKNIILKTLSAIGFPILFT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHH GFLFILLIGSNIVLMEIKESLAYNNDLNTSLIKGASGDLKLGQLEISNLSKGSIVSYDAY HHHHHHHHCCCEEEEHHHHHHHCCCCCCHHHHCCCCCCCEECEEEECCCCCCCEEEEECC TNFSGQGPKLILLVLLSSLTVALLGTTLTSLVANIAQMFYQLLLLPVFSVSQISDDGKLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KKYLNSFWAKFWVVIIYQVSFLFFFVWTEYSLNAWDFIKDEKTEYGGIANLLSFVFSLVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHH ILGGGIAIKTISQEFAGYFGGEGFIRSQQEAHRTAKGVVASAGLLAAAPAIARKQFRKGA HHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RLTGYFDSEKAKIKDDYRKGIITNTQRKLRLNELANKKAELGQTFRAGNNNSDKNFLRRA CEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AAKEAKESKDMGIIEGKGYSLSKTSKITDRAQRAQQKLDNLKNQLPDTDPKTLKQAQKLE HHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KLQHKQEKANQKFAKRSKNLYETVQIRNDTDYRLHSSYQNSYDKTVHDKIPEKTNPDNLK HHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH EKKEDKKENNEKTNSK HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA