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The map label for this gene is 54020232

Identifier: 54020232

GI number: 54020232

Start: 657660

End: 659900

Strand: Direct

Name: 54020232

Synonym: mhp526

Alternate gene names: NA

Gene position: 657660-659900 (Clockwise)

Preceding gene: 54020231

Following gene: 54020233

Centisome position: 73.67

GC content: 28.92

Gene sequence:

>2241_bases
ATGGTAATTAAAATTAAAAATTTACCAAAATGGGCACAATATTTAATTATTTGACTAATTTCTTATTTAATTAGTTTTAT
TTTTACCTTTTTTATCTGACCTTTTATTTTTAGATCTGATATTTCTGATATTTTTAGTACTTTTTCCCTCCAGATCCAGA
ACTGAAAAACCTTAATTTATATTTTTTTATCCGCTCTGCCAGTTTCTGGAATTATTTTTCCGATAATTTGATTTTTTATT
AATTTATCAGGAAATAAATACAAATCCGATTTTGATGATGATTTTCTTTTCTATGATGAAATTAAGAAAAAGGGCTCAAA
AACAAAATTTGATTCTTTATTTTCAAAAATTGATGAAAAACAAGAAGCTGGCTGGGTAATTAAAACTAGTCTGTTAAATA
AAAAAAATAGGGAAATTAAATATTGAACAACAACAAATTCCCATGCTTTTATTCTAGGGGATACCCGTTCTGGGAAAACC
CAGAAATTCATAATTCCGACTATTAAATACAACATTTATCTAAAAAATAAAGATAAACGCCCGAATTTAATGATAATTGA
TCCAAAAGGGGAACTGTTTACATCGCTTTCGGAAGAAATGAAAAAACAGGGATACGAAATTGTCTTAATTGATTTCCAAA
ATCTGGGGAAATCCCGGGGAATAAATTTTTTAGCCCCAATCTGGGATATATTTCATCGGCCTTATCAAAATGAAAGTGAG
AAATTAGAGAATTATGACATAGCTTCAAATTGACTTCAAAAAGTAATTGAGTCAATCCATGACTGAAATGCTGGACCTGA
AAAAAATAGTTTTTGGACAACACAGGCAAAAAATGTAGTTTATACTATTGGTTGGTATTTACTGCTTTATTCAAATGTTG
ATAAAAATTTTTTACGGGAAAAATTTGTTCTGGCAAATTTTATCCATTTCTTATCTTTTGATGCCTTTACTAAAGGCTCC
TGGATTGATGTCTGTAAGTCAACAACTGATTTTATGCTTAAAATTTTTTGTCAGGAAAAAATAATTCCCTTAATAAAAAC
AAATCCAGAAACTTTAACTTCGATTTTAGTTAATGCTTATGCTGGAATTTCAAAGTTTAATTCCCTTGGGCTTAAAATGT
TTAGTTCCAAGGATGAGACTAATTTTGATGAATTAGTTCAGAAGTCAGACTGGGATTTCTGGCAAAAATTTAAAGGAGAA
ATTCGGCCTTTTGTTGTATTTATTACTTTTCAGCTTGATTCAAATATTGGGCAGTTAATGATTCCTGCAATTATTAATAA
TTGTTATTCTTCTTTAATTACAACAGCAAACTCAAAACCAAATAGGAGAAATTATCGTTCCTTTCTATTTTTAGGAGATG
AATTCGGAAACTTACCGCCGATATGACAAATGGCAACGAAGATGTCAACGGCAGCTTCTTATGGAATTTATTTTGGACTT
GTCCTTCAAAATGTTCAACAACTTGAAAAATACGGACAAGAAAAAGATACGATTTTATCAAATTCGACCCTAAAAATTTA
TTTTAGATCAAATGATCTAAAATCTTTAGAGACCTTTGTTAAATTTGCCGGAAAAAAAGAAATTATCAAAAAAAGTCATT
CAAATAATCAAGATCCAAAAAAATCAGGCTCTTTATCAACTTCTTTAGGTCAGGAAGATATTATCACCGTTTCAGAATTA
GCACAAATGCCTCCAGAAGAGAGTTGAATTTTTATTACCGGCCTTAAGCCAATTCATATCAAATCCGAATTTGCATATAA
GATATGAAATGATCCAGAAAGACCACTTGAGAGTTTCTATACTAATAATAAAAACGCTTTTGATTTTGAGTTTATTACAT
TTGATTTTAAAAAAAGTAAGGAATTAGCCAAAAAATGGTCTAGGGAATCAAAATTTGATAAATTTTTTCCAGGAGAAGAT
GAAAAAAGAGAAAAAGAAGATAAAGAAATTAAGGAGTCCAAAAGAGAAATTTTTAGTAAAGAAAAAGAAATTGTTCTAGA
AGACCAAGGAGAAATTTTACCTAAAAAAAGTAATAAAAATTTCCCAGAAAAGGAATATTCCCAGCTAGAACAGGAAATTT
TGAAATTAATAAAAGAAACAAAACAGGCCTATCTCAGGGCAAAACAAGAAAAACAGCCCGAGATAAAAAGATATTTAGAA
GATTTTATTGGGAAGAACCGGATAAAAATTCTAAATTTATACAGACAAATATCAGATAAAAACGAAATAGATTTTAATTA
G

Upstream 100 bases:

>100_bases
GAAGAAGATGACCTTGATTTATCTGATTTTTTGGAAGAACTTGAAAATCAAGACAAATAAAAACAAATTAAAAATTTAGA
TAAAATTTTAGGTCAGAAAA

Downstream 100 bases:

>100_bases
TATTTAAATATAAAAAAAGGAGCCGTTATGCCCCTATACCAAACAAGAATATTATACCACAAAAAGAAAAAAAATGATCC
AAAAAAAAATAAAAATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Conjugation Protein; TraG/TraD Family Protein; Type IV Secretory Pathway VirD4 Component; Icef-Iia; TraG/TraD Family Membrane Protein

Number of amino acids: Translated: 746; Mature: 746

Protein sequence:

>746_residues
MVIKIKNLPKWAQYLIIWLISYLISFIFTFFIWPFIFRSDISDIFSTFSLQIQNWKTLIYIFLSALPVSGIIFPIIWFFI
NLSGNKYKSDFDDDFLFYDEIKKKGSKTKFDSLFSKIDEKQEAGWVIKTSLLNKKNREIKYWTTTNSHAFILGDTRSGKT
QKFIIPTIKYNIYLKNKDKRPNLMIIDPKGELFTSLSEEMKKQGYEIVLIDFQNLGKSRGINFLAPIWDIFHRPYQNESE
KLENYDIASNWLQKVIESIHDWNAGPEKNSFWTTQAKNVVYTIGWYLLLYSNVDKNFLREKFVLANFIHFLSFDAFTKGS
WIDVCKSTTDFMLKIFCQEKIIPLIKTNPETLTSILVNAYAGISKFNSLGLKMFSSKDETNFDELVQKSDWDFWQKFKGE
IRPFVVFITFQLDSNIGQLMIPAIINNCYSSLITTANSKPNRRNYRSFLFLGDEFGNLPPIWQMATKMSTAASYGIYFGL
VLQNVQQLEKYGQEKDTILSNSTLKIYFRSNDLKSLETFVKFAGKKEIIKKSHSNNQDPKKSGSLSTSLGQEDIITVSEL
AQMPPEESWIFITGLKPIHIKSEFAYKIWNDPERPLESFYTNNKNAFDFEFITFDFKKSKELAKKWSRESKFDKFFPGED
EKREKEDKEIKESKREIFSKEKEIVLEDQGEILPKKSNKNFPEKEYSQLEQEILKLIKETKQAYLRAKQEKQPEIKRYLE
DFIGKNRIKILNLYRQISDKNEIDFN

Sequences:

>Translated_746_residues
MVIKIKNLPKWAQYLII*LISYLISFIFTFFI*PFIFRSDISDIFSTFSLQIQN*KTLIYIFLSALPVSGIIFPII*FFI
NLSGNKYKSDFDDDFLFYDEIKKKGSKTKFDSLFSKIDEKQEAGWVIKTSLLNKKNREIKY*TTTNSHAFILGDTRSGKT
QKFIIPTIKYNIYLKNKDKRPNLMIIDPKGELFTSLSEEMKKQGYEIVLIDFQNLGKSRGINFLAPIWDIFHRPYQNESE
KLENYDIASN*LQKVIESIHD*NAGPEKNSFWTTQAKNVVYTIGWYLLLYSNVDKNFLREKFVLANFIHFLSFDAFTKGS
WIDVCKSTTDFMLKIFCQEKIIPLIKTNPETLTSILVNAYAGISKFNSLGLKMFSSKDETNFDELVQKSDWDFWQKFKGE
IRPFVVFITFQLDSNIGQLMIPAIINNCYSSLITTANSKPNRRNYRSFLFLGDEFGNLPPI*QMATKMSTAASYGIYFGL
VLQNVQQLEKYGQEKDTILSNSTLKIYFRSNDLKSLETFVKFAGKKEIIKKSHSNNQDPKKSGSLSTSLGQEDIITVSEL
AQMPPEES*IFITGLKPIHIKSEFAYKI*NDPERPLESFYTNNKNAFDFEFITFDFKKSKELAKKWSRESKFDKFFPGED
EKREKEDKEIKESKREIFSKEKEIVLEDQGEILPKKSNKNFPEKEYSQLEQEILKLIKETKQAYLRAKQEKQPEIKRYLE
DFIGKNRIKILNLYRQISDKNEIDFN
>Mature_746_residues
MVIKIKNLPKWAQYLII*LISYLISFIFTFFI*PFIFRSDISDIFSTFSLQIQN*KTLIYIFLSALPVSGIIFPII*FFI
NLSGNKYKSDFDDDFLFYDEIKKKGSKTKFDSLFSKIDEKQEAGWVIKTSLLNKKNREIKY*TTTNSHAFILGDTRSGKT
QKFIIPTIKYNIYLKNKDKRPNLMIIDPKGELFTSLSEEMKKQGYEIVLIDFQNLGKSRGINFLAPIWDIFHRPYQNESE
KLENYDIASN*LQKVIESIHD*NAGPEKNSFWTTQAKNVVYTIGWYLLLYSNVDKNFLREKFVLANFIHFLSFDAFTKGS
WIDVCKSTTDFMLKIFCQEKIIPLIKTNPETLTSILVNAYAGISKFNSLGLKMFSSKDETNFDELVQKSDWDFWQKFKGE
IRPFVVFITFQLDSNIGQLMIPAIINNCYSSLITTANSKPNRRNYRSFLFLGDEFGNLPPI*QMATKMSTAASYGIYFGL
VLQNVQQLEKYGQEKDTILSNSTLKIYFRSNDLKSLETFVKFAGKKEIIKKSHSNNQDPKKSGSLSTSLGQEDIITVSEL
AQMPPEES*IFITGLKPIHIKSEFAYKI*NDPERPLESFYTNNKNAFDFEFITFDFKKSKELAKKWSRESKFDKFFPGED
EKREKEDKEIKESKREIFSKEKEIVLEDQGEILPKKSNKNFPEKEYSQLEQEILKLIKETKQAYLRAKQEKQPEIKRYLE
DFIGKNRIKILNLYRQISDKNEIDFN

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85744; Mature: 85744

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIKIKNLPKWAQYLIILISYLISFIFTFFIPFIFRSDISDIFSTFSLQIQNKTLIYIFL
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEE
SALPVSGIIFPIIFFINLSGNKYKSDFDDDFLFYDEIKKKGSKTKFDSLFSKIDEKQEAG
HHHCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
WVIKTSLLNKKNREIKYTTTNSHAFILGDTRSGKTQKFIIPTIKYNIYLKNKDKRPNLMI
EEEEEHHHCCCCCEEEEEECCCEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCEEE
IDPKGELFTSLSEEMKKQGYEIVLIDFQNLGKSRGINFLAPIWDIFHRPYQNESEKLENY
ECCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCC
DIASNLQKVIESIHDNAGPEKNSFWTTQAKNVVYTIGWYLLLYSNVDKNFLREKFVLANF
CHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IHFLSFDAFTKGSWIDVCKSTTDFMLKIFCQEKIIPLIKTNPETLTSILVNAYAGISKFN
HHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLGLKMFSSKDETNFDELVQKSDWDFWQKFKGEIRPFVVFITFQLDSNIGQLMIPAIINN
HHHHHEECCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHH
CYSSLITTANSKPNRRNYRSFLFLGDEFGNLPPIQMATKMSTAASYGIYFGLVLQNVQQL
HHHHHHHCCCCCCCCCCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYGQEKDTILSNSTLKIYFRSNDLKSLETFVKFAGKKEIIKKSHSNNQDPKKSGSLSTS
HHHCCCHHHEECCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
LGQEDIITVSELAQMPPEESIFITGLKPIHIKSEFAYKINDPERPLESFYTNNKNAFDFE
CCCHHCEEHHHHHHCCCCCCEEEECCCEEEECCCEEEECCCCCHHHHHHHCCCCCCEEEE
FITFDFKKSKELAKKWSRESKFDKFFPGEDEKREKEDKEIKESKREIFSKEKEIVLEDQG
EEEEECHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
EILPKKSNKNFPEKEYSQLEQEILKLIKETKQAYLRAKQEKQPEIKRYLEDFIGKNRIKI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH
LNLYRQISDKNEIDFN
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVIKIKNLPKWAQYLIILISYLISFIFTFFIPFIFRSDISDIFSTFSLQIQNKTLIYIFL
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEE
SALPVSGIIFPIIFFINLSGNKYKSDFDDDFLFYDEIKKKGSKTKFDSLFSKIDEKQEAG
HHHCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
WVIKTSLLNKKNREIKYTTTNSHAFILGDTRSGKTQKFIIPTIKYNIYLKNKDKRPNLMI
EEEEEHHHCCCCCEEEEEECCCEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCEEE
IDPKGELFTSLSEEMKKQGYEIVLIDFQNLGKSRGINFLAPIWDIFHRPYQNESEKLENY
ECCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCC
DIASNLQKVIESIHDNAGPEKNSFWTTQAKNVVYTIGWYLLLYSNVDKNFLREKFVLANF
CHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IHFLSFDAFTKGSWIDVCKSTTDFMLKIFCQEKIIPLIKTNPETLTSILVNAYAGISKFN
HHHHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
SLGLKMFSSKDETNFDELVQKSDWDFWQKFKGEIRPFVVFITFQLDSNIGQLMIPAIINN
HHHHHEECCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHH
CYSSLITTANSKPNRRNYRSFLFLGDEFGNLPPIQMATKMSTAASYGIYFGLVLQNVQQL
HHHHHHHCCCCCCCCCCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYGQEKDTILSNSTLKIYFRSNDLKSLETFVKFAGKKEIIKKSHSNNQDPKKSGSLSTS
HHHCCCHHHEECCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCC
LGQEDIITVSELAQMPPEESIFITGLKPIHIKSEFAYKINDPERPLESFYTNNKNAFDFE
CCCHHCEEHHHHHHCCCCCCEEEECCCEEEECCCEEEECCCCCHHHHHHHCCCCCCEEEE
FITFDFKKSKELAKKWSRESKFDKFFPGEDEKREKEDKEIKESKREIFSKEKEIVLEDQG
EEEEECHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC
EILPKKSNKNFPEKEYSQLEQEILKLIKETKQAYLRAKQEKQPEIKRYLEDFIGKNRIKI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHH
LNLYRQISDKNEIDFN
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA