Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020209
Identifier: 54020209
GI number: 54020209
Start: 568648
End: 570042
Strand: Direct
Name: 54020209
Synonym: mhp460
Alternate gene names: NA
Gene position: 568648-570042 (Clockwise)
Preceding gene: 54020208
Following gene: 54020210
Centisome position: 63.7
GC content: 29.32
Gene sequence:
>1395_bases ATGCGTCGATCTTTTAAGTGGGCCCTATCTTTGACTCCAATTGTTGCAGGTTCAGTTGGAACTACGGTTTATTTTGTCTC GGGAAATTCAGTTTCAAATTTAGGCGAAATAAAAACAAGCAGGGAAAATGTACAAATTCAAAGTCAATTTAAGCCATTTT CTCCTTCAGAGACCAATGGTTTAAATCAAATTCCTGAAAAACCGATACAAAAACAGGAAGAAAAACAAGCTCCTAAAATT CAAAAAGCACCAATAATTATACCAGAAAAATTAATTAAAAAAACAGAAAACCCAGAAAAACTTAAACCAACAACAATTAT AATTTCTAATAAACAAGAACAAATTATACCACAAGTCGCTCCAAAACCAAATAAAAACCAAAAAATTTTAATTAAGGATA AAGAATTTGAAGGAGAAAAACCAAAAGAAGTTGTAAATAATCAAAAAAGTAAACCTTTAAAAATTCAAGAAAAAAAACAA CCTGACCTTTCACTTCTAAATAAAAAAACTCCAGAAGTCATTGATCCTAAAGTAAAAAAAGAAGAAAATGTTGCTATTGT GATCCCTGAAAAAAACAAAAAAGAAAAAAATATTACAAAACCAAAACCTCCCGAGCCAAAAATTTTAGGTAATAAATTAA TAAAAAACAAAGAAAATACAAAAATTTCAACTGCAAAAACAGATATAGTAATAAAAAAACCTGAACAAAACCAGGAAAAA TATAAAGAAAAATTAATAAAACCACCGATTTTACCGGTTTTATCTGCTCAACCTTTAGTGCAAAAATCTCCCAAAGTTGA AAAACCACTAGAAACACCAGTAAATGAAAAAAAAATTAAGACTGAACTAACAAAGGAACAAAAACAAGAAGAAATTATAG AAATTCCACCAAAACAACAACAAATTAAGGAAGAATCAGAAGAAAAAACTAACAATCAAGAAATCCAAACGCCTATTGAT CAAAATCAAAAACAAGTAGATACAATCCTAAAAGGAATTCAAGAAGATCTTAAGATCCTGGCAAACCCACCAATAAATAA CGAATCGAGCCAAACAAAAGCCAGTTATAATGCAGCCAAAAATCGTATTTATAACTATAAATTTACAGATAAAAAACAAT TTGATTTATTTAAAAAAAGTTTTCCCAAAACGCCGTTGACAGAACAGCAAGCTAAGTATATTTTTGATTTTTGGGAAAAT AATTATGCTCAATTTAATCCCTCAATGGCAAGAATGCAATCGGCTAGAAATATGTGAAGAGCTGAAATTAAAAAAGTTTT AAACATAATTCCAAAGCCACAAGTTGGCGCTTTCAATCGGGCAAGTGGAGGACAAACTTTTATAATTGATTTAAGAAATA AAAATGATAGTGGTTGGGTTCAAGCGCAAAAATAA
Upstream 100 bases:
>100_bases TTCTCTGAAACTTTTGGTTTAAATTTTGAGTTTTGATTTTAAATTGTAAATAAAATAATAAATAAAATAAAGAAAATAAA TTAAATAAAATAAGGAAAAA
Downstream 100 bases:
>100_bases CCTAATTTTTATTTTTTTAAACTATTTATGCTCAAAAAAAATAAAAAGTACTTAAAAGGACACAAAATTTCTTAATTTGA ACCCTAATATTGTTCATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MRRSFKWALSLTPIVAGSVGTTVYFVSGNSVSNLGEIKTSRENVQIQSQFKPFSPSETNGLNQIPEKPIQKQEEKQAPKI QKAPIIIPEKLIKKTENPEKLKPTTIIISNKQEQIIPQVAPKPNKNQKILIKDKEFEGEKPKEVVNNQKSKPLKIQEKKQ PDLSLLNKKTPEVIDPKVKKEENVAIVIPEKNKKEKNITKPKPPEPKILGNKLIKNKENTKISTAKTDIVIKKPEQNQEK YKEKLIKPPILPVLSAQPLVQKSPKVEKPLETPVNEKKIKTELTKEQKQEEIIEIPPKQQQIKEESEEKTNNQEIQTPID QNQKQVDTILKGIQEDLKILANPPINNESSQTKASYNAAKNRIYNYKFTDKKQFDLFKKSFPKTPLTEQQAKYIFDFWEN NYAQFNPSMARMQSARNMWRAEIKKVLNIIPKPQVGAFNRASGGQTFIIDLRNKNDSGWVQAQK
Sequences:
>Translated_464_residues MRRSFKWALSLTPIVAGSVGTTVYFVSGNSVSNLGEIKTSRENVQIQSQFKPFSPSETNGLNQIPEKPIQKQEEKQAPKI QKAPIIIPEKLIKKTENPEKLKPTTIIISNKQEQIIPQVAPKPNKNQKILIKDKEFEGEKPKEVVNNQKSKPLKIQEKKQ PDLSLLNKKTPEVIDPKVKKEENVAIVIPEKNKKEKNITKPKPPEPKILGNKLIKNKENTKISTAKTDIVIKKPEQNQEK YKEKLIKPPILPVLSAQPLVQKSPKVEKPLETPVNEKKIKTELTKEQKQEEIIEIPPKQQQIKEESEEKTNNQEIQTPID QNQKQVDTILKGIQEDLKILANPPINNESSQTKASYNAAKNRIYNYKFTDKKQFDLFKKSFPKTPLTEQQAKYIFDFWEN NYAQFNPSMARMQSARNM*RAEIKKVLNIIPKPQVGAFNRASGGQTFIIDLRNKNDSGWVQAQK >Mature_464_residues MRRSFKWALSLTPIVAGSVGTTVYFVSGNSVSNLGEIKTSRENVQIQSQFKPFSPSETNGLNQIPEKPIQKQEEKQAPKI QKAPIIIPEKLIKKTENPEKLKPTTIIISNKQEQIIPQVAPKPNKNQKILIKDKEFEGEKPKEVVNNQKSKPLKIQEKKQ PDLSLLNKKTPEVIDPKVKKEENVAIVIPEKNKKEKNITKPKPPEPKILGNKLIKNKENTKISTAKTDIVIKKPEQNQEK YKEKLIKPPILPVLSAQPLVQKSPKVEKPLETPVNEKKIKTELTKEQKQEEIIEIPPKQQQIKEESEEKTNNQEIQTPID QNQKQVDTILKGIQEDLKILANPPINNESSQTKASYNAAKNRIYNYKFTDKKQFDLFKKSFPKTPLTEQQAKYIFDFWEN NYAQFNPSMARMQSARNM*RAEIKKVLNIIPKPQVGAFNRASGGQTFIIDLRNKNDSGWVQAQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52975; Mature: 52975
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSFKWALSLTPIVAGSVGTTVYFVSGNSVSNLGEIKTSRENVQIQSQFKPFSPSETNG CCCCEEEEEEECHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEHCCCCCCCCCCCCC LNQIPEKPIQKQEEKQAPKIQKAPIIIPEKLIKKTENPEKLKPTTIIISNKQEQIIPQVA CHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCHHHHCCCCC PKPNKNQKILIKDKEFEGEKPKEVVNNQKSKPLKIQEKKQPDLSLLNKKTPEVIDPKVKK CCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCC EENVAIVIPEKNKKEKNITKPKPPEPKILGNKLIKNKENTKISTAKTDIVIKKPEQNQEK CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECEEEEECCCCHHHH YKEKLIKPPILPVLSAQPLVQKSPKVEKPLETPVNEKKIKTELTKEQKQEEIIEIPPKQQ HHHHHCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH QIKEESEEKTNNQEIQTPIDQNQKQVDTILKGIQEDLKILANPPINNESSQTKASYNAAK HHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHH NRIYNYKFTDKKQFDLFKKSFPKTPLTEQQAKYIFDFWENNYAQFNPSMARMQSARNMRA HCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH EIKKVLNIIPKPQVGAFNRASGGQTFIIDLRNKNDSGWVQAQK HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECC >Mature Secondary Structure MRRSFKWALSLTPIVAGSVGTTVYFVSGNSVSNLGEIKTSRENVQIQSQFKPFSPSETNG CCCCEEEEEEECHHHCCCCCCEEEEEECCCCCHHHHHHCCCCCEEEHCCCCCCCCCCCCC LNQIPEKPIQKQEEKQAPKIQKAPIIIPEKLIKKTENPEKLKPTTIIISNKQEQIIPQVA CHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCHHHHCCCCC PKPNKNQKILIKDKEFEGEKPKEVVNNQKSKPLKIQEKKQPDLSLLNKKTPEVIDPKVKK CCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCC EENVAIVIPEKNKKEKNITKPKPPEPKILGNKLIKNKENTKISTAKTDIVIKKPEQNQEK CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECEEEEECCCCHHHH YKEKLIKPPILPVLSAQPLVQKSPKVEKPLETPVNEKKIKTELTKEQKQEEIIEIPPKQQ HHHHHCCCCCCHHCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH QIKEESEEKTNNQEIQTPIDQNQKQVDTILKGIQEDLKILANPPINNESSQTKASYNAAK HHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHH NRIYNYKFTDKKQFDLFKKSFPKTPLTEQQAKYIFDFWENNYAQFNPSMARMQSARNMRA HCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH EIKKVLNIIPKPQVGAFNRASGGQTFIIDLRNKNDSGWVQAQK HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA